Image Features and Natural Clustering of Worm Body Shapes and Motion. - Wei Geng; Pamela C. Cosman; Joong-Hwan Baek; Charles C. Berry; William R. Schafer (SIP, 2003)

Automatic tracking, feature extraction and classification of C. elegans phenotypes. - Wei Geng; Pamela C. Cosman; Charles C. Berry; Zhaoyang Feng; William R. Schafer (IEEE Trans. Biomed. Eng., 2004)

Selection of Target Sites for Mobile DNA Integration in the Human Genome. - Charles C. Berry; Sridhar Hannenhalli; Jeremy Leipzig; Frederic D. Bushman (PLoS Comput. Biol., 2006)

Estimating abundances of retroviral insertion sites from DNA fragment length data. - Charles C. Berry; Nicolas A. Gillet; Anat Melamed; Niall A. Gormley; Charles R. M. Bangham; Frederic D. Bushman (Bioinform., 2012)

Comparing DNA integration site clusters with scan statistics. - Charles C. Berry; Karen E. Ocwieja; Nirav Malani; Frederic D. Bushman (Bioinform., 2014)