Significance analysis of lexical bias in microarray data. - Charles C. Kim; Stanley Falkow (BMC Bioinform., 2003)

VersaCount: customizable manual tally software for cell counting. - Charles C. Kim; Joseph L. DeRisi (Source Code Biol. Medicine, 2010)

Trimming of sequence reads alters RNA-Seq gene expression estimates. - Claire R. Williams; Alyssa Baccarella; Jay Z. Parrish; Charles C. Kim (BMC Bioinform., 2016)

Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq. - Claire R. Williams; Alyssa Baccarella; Jay Z. Parrish; Charles C. Kim (BMC Bioinform., 2017)

Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance. - Alyssa Baccarella; Claire R. Williams; Jay Z. Parrish; Charles C. Kim (BMC Bioinform., 2018)