SparseAssembler: de novo Assembly with the Sparse de Bruijn Graph - Chengxi Ye; Zhanshan (Sam) Ma; Charles H. Cannon; Mihai Pop; Douglas W. Yu (CoRR, 2011)

SparseAssembler2: Sparse k-mer Graph for Memory Efficient Genome Assembly - Chengxi Ye; Charles H. Cannon; Zhanshan (Sam) Ma; Douglas W. Yu; Mihai Pop (CoRR, 2011)

Exploiting sparseness in de novo genome assembly. - Chengxi Ye; Zhanshan (Sam) Ma; Charles H. Cannon; Mihai Pop; Douglas W. Yu (BMC Bioinform., 2012)

Inference of Markovian properties of molecular sequences from NGS data and applications to comparative genomics. - Jie Ren 006; Kai Song; Minghua Deng; Gesine Reinert; Charles H. Cannon; Fengzhu Sun (Bioinform., 2016)