MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model. - Antony Le Béchec; Elodie Portales-Casamar; Guillaume Vetter; Michèle Moes; Pierre-Joachim Zindy; Anne Saumet; David J. Arenillas; Charles Theillet; Wyeth W. Wasserman; Charles-Henri Lecellier; Evelyne Friederich (BMC Bioinform., 2011)

Probing instructions for expression regulation in gene nucleotide compositions. - Chloé Bessière; May Taha; Florent Petitprez; Jimmy Vandel; Jean-Michel Marin; Laurent Bréhélin; Sophie Lèbre; Charles-Henri Lecellier (PLoS Comput. Biol., 2018)

Identification of long regulatory elements in the genome of Plasmodium falciparum and other eukaryotes. - Christophe Menichelli; Vincent Guitard; Rafael Miyazawa Martins; Sophie Lèbre; Jose-Juan Lopez-Rubio; Charles-Henri Lecellier; Laurent Bréhélin (PLoS Comput. Biol., 2021)