A hierarchical statistical framework for the segmentation of deformable objects in image sequences. - Charles Kervrann; Fabrice Heitz (CVPR, 1994)

Robust Tracking of Stochastic Deformable Models in Long Image Sequences. - Charles Kervrann; Fabrice Heitz (ICIP (3), 1994)

A Markov random field model-based approach to unsupervised texture segmentation using local and global spatial statistics. - Charles Kervrann; Fabrice Heitz (IEEE Trans. Image Process., 1995)

Statistical model-based segmentation of deformable motion. - Charles Kervrann; Fabrice Heitz (ICIP (1), 1996)

Statistical model-based estimation and tracking of non-rigid motion. - Charles Kervrann; Fabrice Heitz; Patrick Pérez (ICPR, 1996)

Generalized Likelihood Ratio-based Face Detection and Extraction of Mouth Features. - Charles Kervrann; Franck Davoine; Patrick Pérez; Haibo Li 001; Robert Forchheimer; Claude Labit (AVBPA, 1997)

Generalized likelihood ratio-based face detection and extraction of mouth features. - Charles Kervrann; Franck Davoine; Patrick Pérez; Robert Forchheimer; Claude Labit (Pattern Recognit. Lett., 1997)

A Hierarchical Markov Modeling Approach for the Segmentation and Tracking of Deformable Shapes. - Charles Kervrann; Fabrice Heitz (Graph. Model. Image Process., 1998)

Learning probabilistic deformation models from image sequences. - Charles Kervrann (Signal Process., 1998)

A Level Line Selection Approach for Object Boundary Estimation. - Charles Kervrann; Mark Hoebeke; Alain Trubuil (ICCV, 1999)

Statistical deformable model-based segmentation of image motion. - Charles Kervrann; Fabrice Heitz (IEEE Trans. Image Process., 1999)

Level Lines as Global Minimizers of Energy Functionals in Image Segmentation. - Charles Kervrann; Mark Hoebeke; Alain Trubuil (ECCV (2), 2000)

Bayesian Object Detection through Level Curves Selection. - Charles Kervrann (Scale-Space, 2001)

Isophotes Selection and Reaction-Diffusion Model for Object Boundaries Estimation. - Charles Kervrann; Mark Hoebeke; Alain Trubuil (Int. J. Comput. Vis., 2002)

Optimal Level Curves and Global Minimizers of Cost Functionals in Image Segmentation. - Charles Kervrann; Alain Trubuil (J. Math. Imaging Vis., 2002)

An Adaptive Window Approach for Image Smoothing and Structures Preserving. - Charles Kervrann (ECCV (3), 2004)

An Adaptive Window Approach for Poisson Noise Reduction and Structure Preserving in Confocal Microscopy. - Alain Trubuil; Charles Kervrann (ISBI, 2004)

An adaptive statistical method for denoising 4D fluorescence image sequences with preservation of spatio-temporal discontinuities. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (ICIP (2), 2005)

Adaptive Spatio-Temporal Restoration for 4D Fluorescence Microscopic Imaging. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (MICCAI, 2005)

Unsupervised Patch-Based Image Regularization and Representation. - Charles Kervrann; Jérôme Boulanger (ECCV (4), 2006)

Estimation of Dynamic Background for Fluorescence Video-Microscopy. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (ICIP, 2006)

Orientation Interpolation and Applications. - Anatole Chessel; Ronan Fablet; Frédéric Cao; Charles Kervrann (ICIP, 2006)

Multiple-target tracking of 3D fluorescent objects based on simulated annealing. - Victor Racine; Ariane Hertzog; Jacqueline Jouanneau; Jean Salamero; Charles Kervrann; Jean-Baptiste Sibarita (ISBI, 2006)

Optimal Spatial Adaptation for Patch-Based Image Denoising. - Charles Kervrann; Jérôme Boulanger (IEEE Trans. Image Process., 2006)

Network Tomography for Trafficking Simulation and Analysis in Fluorescence Microscopy Imaging. - Thierry Pécot; Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (ISBI, 2007)

Bayesian Non-local Means Filter, Image Redundancy and Adaptive Dictionaries for Noise Removal. - Charles Kervrann; Jérôme Boulanger; Pierrick Coupé (SSVM, 2007)

Space-Time Adaptation for Patch-Based Image Sequence Restoration. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (IEEE Trans. Pattern Anal. Mach. Intell., 2007)

Otolith Image Analysis by Computer Vision. - Anatole Chessel; Ronan Fablet; Charles Kervrann; Frédéric Cao (BIOSIGNALS (2), 2008)

Network Tomography-Based Tracking for Intracellular Traffic Analysis in Fluorescence Microscopy Imaging. - Thierry Pécot; Charles Kervrann; Patrick Bouthemy (BIOSIGNALS (1), 2008)

Non-parametric regression for patch-based fluorescence microscopy image sequence denoising. - Jérôme Boulanger; Jean-Baptiste Sibarita; Charles Kervrann; Patrick Bouthemy (ISBI, 2008)

Bayesian non local means-based speckle filtering. - Pierrick Coupé; Pierre Hellier; Charles Kervrann; Christian Barillot (ISBI, 2008)

Minimal paths and probabilistic models for origin-destination traffic estimation in live cell imaging. - Thierry Pécot; Charles Kervrann; Patrick Bouthemy (ISBI, 2008)

Patch-Based Markov Models for Event Detection in Fluorescence Bioimaging. - Thierry Pécot; Charles Kervrann; Sabine Bardin; Bruno Goud; Jean Salamero (MICCAI (2), 2008)

3D Wavelet Subbands Mixing for Image Denoising. - Pierrick Coupé; Pierre Hellier; Sylvain Prima; Charles Kervrann; Christian Barillot (Int. J. Biomed. Imaging, 2008)

Local Adaptivity to Variable Smoothness for Exemplar-Based Image Regularization and Representation. - Charles Kervrann; Jérôme Boulanger (Int. J. Comput. Vis., 2008)

An Optimized Blockwise Nonlocal Means Denoising Filter for 3-D Magnetic Resonance Images. - Pierrick Coupé; Pierre Yger; Sylvain Prima; Pierre Hellier; Charles Kervrann; Christian Barillot (IEEE Trans. Medical Imaging, 2008)

A Fourier-Based Method for Detecting Curved Microtubule Centers: Application to Straightening of Cryo-Electron Microscope Images. - Sophie Blestel; Charles Kervrann; Denis Chrétien (ISBI, 2009)

Evaluation of Image Sequences Additive Decomposition Algorithms for Membrane Analysis in Fluorescence Video-Microscopy. - Anatole Chessel; Thierry Pécot; Sabine Bardin; Charles Kervrann; Jean Salamero (ISBI, 2009)

Conditional Random Fields for Object and Background Estimation in Fluorescence Video-Microscopy. - Thierry Pécot; Anatole Chessel; Sabine Bardin; Jean Salamero; Patrick Bouthemy; Charles Kervrann (ISBI, 2009)

Computational Geometry-Based Scale-Space and Modal Image Decomposition. - Anatole Chessel; Bertrand Cinquin; Sabine Bardin; Jean Salamero; Charles Kervrann (SSVM, 2009)

A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy (Medical Image Anal., 2009)

Nonlocal Means-Based Speckle Filtering for Ultrasound Images. - Pierrick Coupé; Pierre Hellier; Charles Kervrann; Christian Barillot (IEEE Trans. Image Process., 2009)

Modèles statistiques pour l'analyse d'images, algorithmes et applications en imagerie bio-cellulaire et moléculaire. (Statistical models for image analysis, algorithms and application to bio-cellular and molecular imaging). - Charles Kervrann (2010)

A detection-based framework for the analysis of recycling in TIRF microscopy. - Anatole Chessel; Bertrand Cinquin; Sabine Bardin; Jérôme Boulanger; Jean Salamero; Charles Kervrann (ISBI, 2010)

Patch-Based Nonlocal Functional for Denoising Fluorescence Microscopy Image Sequences. - Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy; Peter Elbau; Jean-Baptiste Sibarita; Jean Salamero (IEEE Trans. Medical Imaging, 2010)

Multiscale NeighborhoodWise Decision Fusion for Redundancy Detection in Image Pairs. - Charles Kervrann; Jérôme Boulanger; Thierry Pécot; Patrick Pérez; Jean Salamero (Multiscale Model. Simul., 2011)

Tracking Growing Axons by Particle Filtering in 3D + t Fluorescent Two-Photon Microscopy Images. - Huei-Fang Yang; Xavier Descombes; Charles Kervrann; Caroline Medioni; Florence Besse (ACCV (3), 2012)

Semi-local variational optical flow estimation. - Denis Fortun; Charles Kervrann (ICIP, 2012)

Lifetime map reconstruction in frequency-domain fluorescence lifetime imaging microscopy. - Philippe Roudot; Charles Kervrann; François Waharte; Jérôme Boulanger (ICIP, 2012)

Lifetime estimation of moving vesicles in frequency-domain fluorescence lifetime imaging microscopy. - Philippe Roudot; Charles Kervrann; François Waharte (ISBI, 2012)

Frame-by-frame crowd motion classification from affine motion models. - Antoine Basset; Patrick Bouthemy; Charles Kervrann (AVSS, 2013)

A Maximum Likelihood method for lifetime estimation in photon counting-based Fluorescence Lifetime Imaging Microscopy. - Anatole Chessel; François Waharte; Jean Salamero; Charles Kervrann (EUSIPCO, 2013)

Correlation and variational approaches for motion and diffusion estimation in fluorescence imaging. - Denis Fortun; Chen Chen; Perrine Paul-Gilloteaux; François Waharte; Jean Salamero; Charles Kervrann (EUSIPCO, 2013)

Aggregation of patch-based estimations for illumination-invariant optical flow in live cell imaging. - Denis Fortun; Patrick Bouthemy; Perrine Paul-Gilloteaux; Charles Kervrann (ISBI, 2013)

Robust parametric stabilization of moving cells with intensity correction in light microscopy image sequences. - Solene Ozere; Patrick Bouthemy; Fabien Spindler; Perrine Paul-Gilloteaux; Charles Kervrann (ISBI, 2013)

Noise modeling for intensified camera in fluorescence imaging: Application to image denoising. - Philippe Roudot; Charles Kervrann; Jérôme Boulanger; François Waharte (ISBI, 2013)

Recovery of motion patterns and dominant paths in videos of crowded scenes. - Antoine Basset; Patrick Bouthemy; Charles Kervrann (ICIP, 2014)

Conditional random fields for tubulin-microtubule segmentation in cryo-electron tomography. - Charles Kervrann; Sophie Blestel; Denis Chrétien (ICIP, 2014)

Approximate Bayesian computation, stochastic algorithms and non-local means for complex noise models. - Charles Kervrann; Philippe Roudot; François Waharte (ICIP, 2014)

SLT-LoG: A vesicle segmentation method with automatic scale selection and local thresholding applied to TIRF microscopy. - Antoine Basset; Jérôme Boulanger; Patrick Bouthemy; Charles Kervrann; Jean Salamero (ISBI, 2014)

Localization and classification of membrane dynamics in TIRF microscopy image sequences. - Antoine Basset; Patrick Bouthemy; Jérôme Boulanger; Jean Salamero; Charles Kervrann (ISBI, 2014)

Estimation of the flow of particles within a partition of the image domain in fluorescence video-microscopy. - Thierry Pécot; Jérôme Boulanger; Charles Kervrann; Patrick Bouthemy; Jean Salamero (ISBI, 2014)

PEWA: Patch-based Exponentially Weighted Aggregation for image denoising. - Charles Kervrann (NIPS, 2014)

A Two-Color Interacting Random Balls Model for Co-localization Analysis of Proteins. - F. Lavancier; Charles Kervrann (GSI, 2015)

Detection and estimation of membrane diffusion during exocytosis in TIRFM image sequences. - Antoine Basset; Patrick Bouthemy; Jérôme Boulanger; François Waharte; Charles Kervrann; Jean Salamero (ISBI, 2015)

Automatic core segmentation and registration for fast tissue microarray de-arraying. - Hoai-Nam Nguyen; Charles Kervrann; Cyril Cauchois; Vincent Paveau (ISBI, 2015)

Sparse Aggregation Framework for Optical Flow Estimation. - Denis Fortun; Patrick Bouthemy; Charles Kervrann (SSVM, 2015)

Optical flow modeling and computation: A survey. - Denis Fortun; Patrick Bouthemy; Charles Kervrann (Comput. Vis. Image Underst., 2015)

Détection de spots avec sélection d'échelle automatique et seuillage adaptatif en microscopie de fluorescence. - Antoine Basset; Jérôme Boulanger; Patrick Bouthemy; Charles Kervrann; Jean Salamero (Traitement du Signal, 2015)

Adaptive Spot Detection With Optimal Scale Selection in Fluorescence Microscopy Images. - Antoine Basset; Jérôme Boulanger; Jean Salamero; Patrick Bouthemy; Charles Kervrann (IEEE Trans. Image Process., 2015)

Background Fluorescence Estimation and Vesicle Segmentation in Live Cell Imaging With Conditional Random Fields. - Thierry Pécot; Patrick Bouthemy; Jérôme Boulanger; Anatole Chessel; Sabine Bardin; Jean Salamero; Charles Kervrann (IEEE Trans. Image Process., 2015)

A common image representation and a patch-based search for correlative light-electron-microscopy (CLEM) registration. - Bertha Mayela Toledo Acosta; Patrick Bouthemy; Charles Kervrann (ISBI, 2016)

An adaptive statistical test to detect non Brownian diffusion from particle trajectories. - Vincent Briane; Myriam Vimond; Charles Kervrann (ISBI, 2016)

Aggregation of local parametric candidates with exemplar-based occlusion handling for optical flow. - Denis Fortun; Patrick Bouthemy; Charles Kervrann (Comput. Vis. Image Underst., 2016)

A Variational Aggregation Framework for Patch-Based Optical Flow Estimation. - Denis Fortun; Patrick Bouthemy; Charles Kervrann (J. Math. Imaging Vis., 2016)

Introduction to the Issue on Advanced Signal Processing in Microscopy and Cell Imaging. - Charles Kervrann; Scott T. Acton; Jean-Christophe Olivo-Marin; Carlos Oscar Sánchez Sorzano; Michael Unser (IEEE J. Sel. Top. Signal Process., 2016)

A Guided Tour of Selected Image Processing and Analysis Methods for Fluorescence and Electron Microscopy. - Charles Kervrann; Carlos Oscar Sánchez Sorzano; Scott T. Acton; Jean-Christophe Olivo-Marin; Michael Unser (IEEE J. Sel. Top. Signal Process., 2016)

Counting-Based Particle Flux Estimation for Traffic Analysis in Live Cell Imaging. - Thierry Pécot; Charles Kervrann; Jean Salamero; Jérôme Boulanger (IEEE J. Sel. Top. Signal Process., 2016)

Multi-scale spot segmentation with selection of image scales. - Bertha Mayela Toledo Acosta; Antoine Basset; Patrick Bouthemy; Charles Kervrann (ICASSP, 2017)

Spatially-Variant Kernel for Optical Flow Under Low Signal-to-Noise Ratios Application to Microscopy. - Denis Fortun; Noémie Debroux; Charles Kervrann (ICCV Workshops, 2017)

An extended model of vesicle fusion at the plasma membrane to estimate protein lateral diffusion from TIRF microscopy images. - Antoine Basset; Patrick Bouthemy; Jérôme Boulanger; François Waharte; Jean Salamero; Charles Kervrann (BMC Bioinform., 2017)

Nonlocal Means and Optimal Weights for Noise Removal. - Qiyu Jin; Ion Grama; Charles Kervrann; Quansheng Liu (SIAM J. Imaging Sci., 2017)

Piecewise-Stationary Motion Modeling and Iterative Smoothing to Track Heterogeneous Particle Motions in Dense Environments. - Philippe Roudot; Liya Ding 001; Khuloud Jaqaman; Charles Kervrann; Gaudenz Danuser (IEEE Trans. Image Process., 2017)

A sparse-to-dense method for 3D optical flow estimation in 3D light-microscopy image sequences. - Sandeep Manandhar; Patrick Bouthemy; Erik Welf; Philippe Roudot; Charles Kervrann (ISBI, 2018)

A Monte Carlo Framework for Denoising and Missing Wedge Reconstruction in Cryo-electron Tomography. - Emmanuel Moebel; Charles Kervrann (Patch-MI@MICCAI, 2018)

ATMAD: robust image analysis for Automatic Tissue MicroArray De-arraying. - Hoai-Nam Nguyen; Vincent Paveau; Cyril Cauchois; Charles Kervrann (BMC Bioinform., 2018)

A Variational Method for Dejittering Large Fluorescence Line Scanner Images. - Hoai-Nam Nguyen; Vincent Paveau; Cyril Cauchois; Charles Kervrann (IEEE Trans. Computational Imaging, 2018)

Classification in Cryo-Electron Tomograms. - Ilja Gubins; Gijs van der Schot; Remco C. Veltkamp; Friedrich Förster; Xuefeng Du; Xiangrui Zeng; Zhenxi Zhu; Lufan Chang; Min Xu 009; Emmanuel Moebel; Antonio Martínez-Sánchez; Charles Kervrann; et al. (3DOR@Eurographics, 2019)

Empirical Sure-Guided Microscopy Super-Resolution Image Reconstruction from Confocal Multi-Array Detectors. - Sylvain Prigent 004; Stephanie Dutertre; Charles Kervrann (ICASSP, 2020)

Dense Mapping of Intracellular Diffusion and Drift from Single-Particle Tracking Data Analysis. - Antoine Salomon; Cesar Augusto Valades-Cruz; Ludovic Leconte; Charles Kervrann (ICASSP, 2020)

3D Optical Flow Estimation Combining 3D Census Signature and Total Variation Regularization. - Sandeep Manandhar; Patrick Bouthemy; Erik Welf; Philippe Roudot; Charles Kervrann (ISBI, 2020)

An overview of diffusion models for intracellular dynamics analysis. - Vincent Briane; Myriam Vimond; Charles Kervrann (Briefings Bioinform., 2020)

A sequential algorithm to detect diffusion switching along intracellular particle trajectories. - Vincent Briane; Myriam Vimond; Cesar Augusto Valades-Cruz; Antoine Salomon; Christian Wunder; Charles Kervrann (Bioinform., 2020)

3D flow field estimation and assessment for live cell fluorescence microscopy. - Sandeep Manandhar; Patrick Bouthemy; Erik Welf; Gaudenz Danuser; Philippe Roudot; Charles Kervrann (Bioinform., 2020)

Simulation of Astrocytic Calcium Dynamics in Lattice Light Sheet Microscopy Images. - Anaïs Badoual; Misa Arizono; Audrey Denizot; Mathieu Ducros; Hugues Berry; U. Valentin Nägerl; Charles Kervrann (ISBI, 2021)

Probabilistic Reconstruction of Truncated Particle Trajectories on a Closed Surface. - Yunjiao Lu; Pierre Hodara; Charles Kervrann; Alain Trubuil (Multiscale Model. Simul., 2021)

Towards a Unified View of Unsupervised Non-Local Methods for Image Denoising: The NL-Ridge Approach. - Sébastien Herbreteau; Charles Kervrann (ICIP, 2022)

Timeline Design Space for Immersive Exploration of Time-Varying Spatial 3D Data. - Gwendal Fouché; Ferran Argelaguet-Sanz; Emmanuel Faure; Charles Kervrann (VRST, 2022)

STracking: a free and open-source Python library for particle tracking and analysis. - Sylvain Prigent 004; Cesar Augusto Valades-Cruz; Ludovic Leconte; Jean Salamero; Charles Kervrann (Bioinform., 2022)

Towards unsupervised classification of macromolecular complexes in cryo electron tomography: Challenges and opportunities. - Emmanuel Moebel; Charles Kervrann (Comput. Methods Programs Biomed., 2022)

Immersive and Interactive Visualization of 3D Spatio-Temporal Data using a Space Time Hypercube. - Gwendal Fouché; Ferran Argelaguet; Emmanuel Faure; Charles Kervrann (CoRR, 2022)

Unsupervised Linear and Iterative Combinations of Patches for Image Denoising. - Sébastien Herbreteau; Charles Kervrann (CoRR, 2022)

Challenges of intracellular visualization using virtual and augmented reality. - Cesar Augusto Valades-Cruz; Ludovic Leconte; Gwendal Fouché; Thomas Blanc; Nathan Van Hille; Kevin Fournier; Tao Laurent; Benjamin Gallean; Francois Deslandes; Bassam Hajj; Emmanuel Faure; Ferran Argelaguet; et al. (Frontiers Bioinform., 2022)

DCT2net: An Interpretable Shallow CNN for Image Denoising. - Sébastien Herbreteau; Charles Kervrann (IEEE Trans. Image Process., 2022)

Normalization-Equivariant Neural Networks with Application to Image Denoising. - Sébastien Herbreteau; Emmanuel Moebel; Charles Kervrann (NeurIPS, 2023)

Immersive and interactive visualization of 3D spatio-temporal data using a space time hypercube: Application to cell division and morphogenesis analysis. - Gwendal Fouché; Ferran Argelaguet; Emmanuel Faure; Charles Kervrann (Frontiers Bioinform., 2023)

A unified framework of non-local parametric methods for image denoising. - Sébastien Herbreteau; Charles Kervrann (CoRR, 2024)

On normalization-equivariance properties of supervised and unsupervised denoising methods: a survey. - Sébastien Herbreteau; Charles Kervrann (CoRR, 2024)

Linear Combinations of Patches are Unreasonably Effective for Single-Image Denoising. - Sébastien Herbreteau; Charles Kervrann (IEEE Trans. Image Process., 2024)

Prediction of Parametric Surfaces for Multi-object Segmentation in 3D Biological Imaging. - Quentin Rapilly; Anaïs Badoual; Pierre Maindron; Guenaelle Bouet; Charles Kervrann (SSVM (1), 2025)

A Unified Framework of Nonlocal Parametric Methods for Image Denoising. - Sébastien Herbreteau; Charles Kervrann (SIAM J. Imaging Sci., 2025)