A C version of Fourier-derived affinity spectrum analysis (FASA) to resolve binding heterogeneity. - Jeffrey I. Mechanick; Charles S. Peskin (Comput. Appl. Biosci., 1990)

Computation of Geodesic Trajectories on Tubular Surfaces. - James Sneyd; Charles S. Peskin (SIAM J. Sci. Comput., 1990)

Stability and Instability in the Computation of Flows with Moving Immersed Boundaries: A Comparison of Three Methods. - Cheng Tu; Charles S. Peskin (SIAM J. Sci. Comput., 1992)

Shared-Memory Parallel Vector Implementation of the Immersed Boundary Method for the Computation of Blood Flow in the Beating Mammalian Heart. - David McQueen; Charles S. Peskin (J. Supercomput., 1997)

The Role of Protein Flexibility in Molecular Motor Function: Coupled Diffusion in a Tilted Periodic Potential. - Charles S. Peskin; Timothy C. Elston (SIAM J. Appl. Math., 2000)

Protein Flexibility and the Correlation Ratchet. - Charles S. Peskin; Dwight You; Timothy C. Elston (SIAM J. Appl. Math., 2000)

Two-Dimensional Simulations of Valveless Pumping Using the Immersed Boundary Method. - Eunok Jung; Charles S. Peskin (SIAM J. Sci. Comput., 2001)

Parametric Resonance in Immersed Elastic Boundaries. - Ricardo Cortez; Charles S. Peskin; John M. Stockie; Douglas Varela (SIAM J. Appl. Math., 2004)

Simulations of the Whirling Instability by the Immersed Boundary Method. - Sookkyung Lim; Charles S. Peskin (SIAM J. Sci. Comput., 2004)

Action Potential Duration Gradient Protects the Right Atrium from Fibrillating. - Marc Ridler; David M. McQueen; Charles S. Peskin; Edward J. Vigmond (EMBC, 2006)

Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations. - Samuel A. Isaacson; Charles S. Peskin (SIAM J. Sci. Comput., 2006)

2-D Parachute Simulation by the Immersed Boundary Method. - Yongsam Kim; Charles S. Peskin (SIAM J. Sci. Comput., 2006)

Decoding modulation of the neuromuscular transform. - Estee Stern; Timothy J. Fort; Mark W. Miller; Charles S. Peskin; Vladimir Brezina (Neurocomputing, 2007)

A stochastic immersed boundary method for fluid-structure dynamics at microscopic length scales. - Paul J. Atzberger; Peter R. Kramer; Charles S. Peskin (J. Comput. Phys., 2007)

An adaptive, formally second order accurate version of the immersed boundary method. - Boyce E. Griffith; Richard D. Hornung; David McQueen; Charles S. Peskin (J. Comput. Phys., 2007)

Validation of a simple method for representing spheres and slender bodies in an immersed boundary method for Stokes flow on an unbounded domain. - Thomas T. Bringley; Charles S. Peskin (J. Comput. Phys., 2008)

Dynamics of a Closed Rod with Twist and Bend in Fluid. - Sookkyung Lim; Anca Ferent; X. Sheldon Wang; Charles S. Peskin (SIAM J. Sci. Comput., 2008)

A universal programmable fiber architecture for the representation of a general incompressible linearly elastic material as a fiber-reinforced fluid. - Yoichiro Mori; Charles S. Peskin (Adv. Appl. Math., 2009)

Tether Force Constraints in Stokes Flow by the Immersed Boundary Method on a Periodic Domain. - Joseph M. Teran; Charles S. Peskin (SIAM J. Sci. Comput., 2009)

Numerical simulations of two-dimensional foam by the immersed boundary method. - Yongsam Kim; Ming-Chih Lai; Charles S. Peskin (J. Comput. Phys., 2010)

The immersed boundary method for advection-electrodiffusion with implicit timestepping and local mesh refinement. - Pilhwa Lee; Boyce E. Griffith; Charles S. Peskin (J. Comput. Phys., 2010)

Optimal control mechanism involving the human kidney. - Yu Jiang 003; Srinivasa Chemudupati; Jan Morup Jorgensen; Zhong-Ping Jiang; Charles S. Peskin (CDC/ECC, 2011)

An immersed boundary energy-based method for incompressible viscoelasticity. - Dharshi Devendran; Charles S. Peskin (J. Comput. Phys., 2012)

Staggered Schemes for Fluctuating Hydrodynamics. - Florencio Balboa Usabiaga; John B. Bell; Rafael Delgado-Buscalioni; Aleksandar Donev; Thomas G. Fai; Boyce E. Griffith; Charles S. Peskin (Multiscale Model. Simul., 2012)

Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers I: Numerical Method and Results. - Thomas G. Fai; Boyce E. Griffith; Yoichiro Mori; Charles S. Peskin (SIAM J. Sci. Comput., 2013)

Numerical simulations of three-dimensional foam by the immersed boundary method. - Yongsam Kim; Ming-Chih Lai; Charles S. Peskin; Yunchang Seol (J. Comput. Phys., 2014)

Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers II: Theory. - Thomas G. Fai; Boyce E. Griffith; Yoichiro Mori; Charles S. Peskin (SIAM J. Sci. Comput., 2014)

Erratum: Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers I: Numerical Method and Results. - Thomas G. Fai; Boyce E. Griffith; Yoichiro Mori; Charles S. Peskin (SIAM J. Sci. Comput., 2014)

Simulation of Osmotic Swelling by the Stochastic Immersed Boundary Method. - Chen-Hung Wu; Thomas G. Fai; Paul J. Atzberger; Charles S. Peskin (SIAM J. Sci. Comput., 2015)

A Gaussian-like immersed-boundary kernel with three continuous derivatives and improved translational invariance. - Yuanxun Bao; Jason Kaye; Charles S. Peskin (J. Comput. Phys., 2016)

An Immersed Boundary method with divergence-free velocity interpolation and force spreading. - Yuanxun Bao; Aleksandar Donev; Boyce E. Griffith; David McQueen; Charles S. Peskin (J. Comput. Phys., 2017)

Image-based model of the spectrin cytoskeleton for red blood cell simulation. - Thomas G. Fai; Alejandra Leo-Macias; David L. Stokes; Charles S. Peskin (PLoS Comput. Biol., 2017)

Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus. - Jingwei Ma; Myan Do; Mark A. Le Gros; Charles S. Peskin; Carolyn A. Larabell; Yoichiro Mori; Samuel A. Isaacson (PLoS Comput. Biol., 2020)

An Immersed Boundary Method With Subgrid Resolution and Improved Numerical Stability Applied to Slender Bodies in Stokes Flow. - Ondrej Maxian; Charles S. Peskin (SIAM J. Sci. Comput., 2020)

The hydrodynamics of a twisting, bending, inextensible fiber in Stokes flow. - Ondrej Maxian; Brennan Sprinkle; Charles S. Peskin; Aleksandar Donev (CoRR, 2022)

An analysis of the numerical stability of the immersed boundary method. - Mengjian Hua; Charles S. Peskin (J. Comput. Phys., 2022)

Simulating Cardiac Fluid Dynamics in the Human Heart. - Marshall Davey; Charles Puelz; Simone Rossi 003; Margaret Anne Smith; David R. Wells; Greg Sturgeon; William Paul Segars; John P. Vavalle; Charles S. Peskin; Boyce E. Griffith (CoRR, 2023)

A Fourier spectral immersed boundary method with exact translation invariance, improved boundary resolution, and a divergence-free velocity field. - Zhe Chen; Charles S. Peskin (J. Comput. Phys., 2024)