Protein Structure Prediction Using Rosetta. - Carol A. Rohl; Charlie E. M. Strauss; Kira M. S. Misura; David Baker 001 (Numerical Computer Methods, Part D, 2004)

Parallel tempering in Rosetta Practice. - Yaohang Li; Charlie E. M. Strauss; Andrey Gorin (Advances in Bioinformatics and Its Applications, 2005)

A comparative study of probability collectives based multi-agent systems and genetic algorithms. - Chien-Feng Huang; Stefan Bieniawski; David H. Wolpert; Charlie E. M. Strauss (GECCO, 2005)

Practical conversion from torsion space to Cartesian space for in silico protein synthesis. - Jerod Parsons; J. Bradley Holmes; J. Maurice Rojas; Jerry Tsai; Charlie E. M. Strauss (J. Comput. Chem., 2005)

Large-Scale Testing of Bibliome Informatics Using Pfam Protein Families. - Ana Gabriela Maguitman; Andreas Rechtsteiner; Karin Verspoor; Charlie E. M. Strauss; Luis M. Rocha (Pacific Symposium on Biocomputing, 2006)

Advances in Distributed Optimization Using Probability Collectives. - David H. Wolpert; Charlie E. M. Strauss; Dev G. Rajnarayan (Adv. Complex Syst., 2006)

Deriving Protein Structure Topology from the Helix Skeletion in Low Resolution Density Map using Rosetta. - Yonggang Lu; Jing He 002; Charlie E. M. Strauss (APBC, 2007)

Deriving Topology and Sequence Alignment for the Helix Skeleton in Low-Resolution protein Density Maps. - Yonggang Lu; Jing He 002; Charlie E. M. Strauss (J. Bioinform. Comput. Biol., 2008)

Better together: Elements of successful scientific software development in a distributed collaborative community. - Julia Koehler Leman; Brian D. Weitzner; P. Douglas Renfrew; Steven M. Lewis; Rocco Moretti; Andrew M. Watkins; Vikram Khipple Mulligan; Sergey Lyskov; Jared Adolf-Bryfogle; Jason W. Labonte; Justyna Krys; RosettaCommons Consortium; et al. (PLoS Comput. Biol., 2020)