Xenolog classification. - Charlotte A. Darby; Maureen Stolzer; Patrick J. Ropp; Daniel Barker; Dannie Durand (Bioinform., 2017)

Vargas: heuristic-free alignment for assessing linear and graph read aligners. - Charlotte A. Darby; Ravi Gaddipati; Michael C. Schatz; Ben Langmead (Bioinform., 2020)

scHLAcount: allele-specific HLA expression from single-cell gene expression data. - Charlotte A. Darby; Michael J. T. Stubbington; Patrick J. Marks; Álvaro Martínez Barrio; Ian T. Fiddes (Bioinform., 2020)