The impact of RNA-seq alignment pipeline on detection of differentially expressed genes. - Cheng Yang 001; Po-Yen Wu; John H. Phan; May D. Wang (GlobalSIP, 2014)

The impact of RNA-seq aligners on gene expression estimation. - Cheng Yang 001; Po-Yen Wu; Li Tong 001; John H. Phan; May D. Wang (BCB, 2015)

Evaluating the impact of sequencing error correction for RNA-seq data with ERCC RNA spike-in controls. - Li Tong 001; Cheng Yang 001; Po-Yen Wu; May D. Wang (BHI, 2016)

LncADeep: an ab initio lncRNA identification and functional annotation tool based on deep learning. - Cheng Yang 001; Longshu Yang; Man Zhou; Haoling Xie; Chengjiu Zhang; May D. Wang; Huaiqiu Zhu (Bioinform., 2018)

An ab initio lncRNA identification and functional annotation tool based on deep learning. - Cheng Yang 001 (2019)

LncADeep performance on full-length transcripts. - Cheng Yang 001; Man Zhou; Haoling Xie; Huaiqiu Zhu (Nat. Mach. Intell., 2021)