DeePhafier: a phage lifestyle classifier using a multilayer self-attention neural network combining protein information. - Yan Miao; Zhenyuan Sun; Chen Lin; Haoran Gu; Chenjing Ma; Yingjian Liang; Guohua Wang (Briefings Bioinform., 2024)

VirGrapher: a graph-based viral identifier for long sequences from metagenomes. - Yan Miao; Zhenyuan Sun; Chenjing Ma; Chen Lin; Guohua Wang; Chunxue Yang (Briefings Bioinform., 2024)

A cell-interacting and multi-correcting method for automatic circulating tumor cells detection. - Xuan Zhang; Rensheng Lai; Ling Bai; Jianxin Ji; Ruihao Qin; Lihong Jiang; Bin Meng; Ying Zhang; Xiaohan Zheng; Yan Wang; Xiang Kui; Liuchao Zhang; et al. (Artif. Intell. Medicine, 2025)