A network-based matrix factorization framework for ceRNA co-modules recognition of cancer genomic data. - Yujie Wang; Gang Zhou; Tianhao Guan; Yan Wang; Chenxu Xuan; Tao Ding; Jie Gao (Briefings Bioinform., 2022)

scBPGRN: Integrating single-cell multi-omics data to construct gene regulatory networks based on BP neural network. - Chenxu Xuan; Yan Wang; Bai Zhang; Hanwen Wu; Tao Ding; Jie Gao (Comput. Biol. Medicine, 2022)

P-CSN: single-cell RNA sequencing data analysis by partial cell-specific network. - Yan Wang; Chenxu Xuan; Hanwen Wu; Bai Zhang; Tao Ding; Jie Gao (Briefings Bioinform., 2023)

Predicting potential microbe-disease associations based on multi-source features and deep learning. - Liugen Wang; Yan Wang 092; Chenxu Xuan; Bai Zhang; Hanwen Wu; Jie Gao (Briefings Bioinform., 2023)

scGAMNN: Graph Antoencoder-Based Single-Cell RNA Sequencing Data Integration Algorithm Using Mutual Nearest Neighbors. - Bai Zhang; Hanwen Wu; Yan Wang 092; Chenxu Xuan; Jie Gao (IEEE J. Biomed. Health Informatics, 2023)