Flexible k-mers with variable-length indels for identifying binding sequences of protein dimers. - Chenyang Hong; Kevin Y. Yip (Briefings Bioinform., 2020)

Multi-modal Self-supervised Pre-training for Regulatory Genome Across Cell Types. - Shentong Mo; Xi Fu; Chenyang Hong; Yizhen Chen; Yuxuan Zheng; Xiangru Tang; Zhiqiang Shen; Eric P. Xing; Yanyan Lan (CoRR, 2021)

Simultaneous Semantic and Instance Segmentation for Colon Nuclei Identification and Counting. - Lihao Liu; Chenyang Hong; Angelica I. Avilés-Rivero; Carola-Bibiane Schönlieb (MIUA, 2022)

Reusability report: Capturing properties of biological objects and their relationships using graph neural networks. - Chenyang Hong; Qin Cao; Zhenghao Zhang; Stephen Kwok-Wing Tsui; Kevin Y. Yip (Nat. Mach. Intell., 2022)

CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Martin Weigert 001; Uwe Schmidt; Wenhua Zhang; Jun Zhang 018; Sen Yang 006; Jinxi Xiang; Xiyue Wang; Josef Lorenz Rumberger; Elias Baumann; et al. (CoRR, 2023)

Accurate identification of structural variations from cancer samples. - Le Li; Chenyang Hong; Jie Xu; Claire Yik-Lok Chung; Alden King-Yung Leung; Delbert Almerick T. Boncan; Lixin Cheng; Kwok-Wai Lo; Paul B. S. Lai; John Wong; Jingying Zhou; Alfred Sze-Lok Cheng; et al. (Briefings Bioinform., 2024)

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting. - Simon Graham; Quoc Dang Vu; Mostafa Jahanifar; Martin Weigert 001; Uwe Schmidt; Wenhua Zhang; Jun Zhang 018; Sen Yang 006; Jinxi Xiang; Xiyue Wang; Josef Lorenz Rumberger; Elias Baumann; et al. (Medical Image Anal., 2024)