MADOKA: an ultra-fast approach for large-scale protein structure similarity searching. - Lei Deng 002; Guolun Zhong; Chenzhe Liu; Judong Luo; Hui Liu 026 (BMC Bioinform., 2019)

Nabe: an energetic database of amino acid mutations in protein-nucleic acid binding interfaces. - Junyi Liu; Siyu Liu; Chenzhe Liu; Yaping Zhang; Yuliang Pan; Zixiang Wang; Jiacheng Wang; Ting Wen; Lei Deng 002 (Database J. Biol. Databases Curation, 2021)