A word-oriented approach to alignment validation. - Robert G. Beiko; Cheong Xin Chan; Mark A. Ragan (Bioinform., 2005)

Detecting recombination in evolving nucleotide sequences. - Cheong Xin Chan; Robert G. Beiko; Mark A. Ragan (BMC Bioinform., 2006)

A two-phase strategy for detecting recombination in nucleotide sequences. - Cheong Xin Chan; Robert G. Beiko; Mark A. Ragan (South Afr. Comput. J., 2007)

Clustering evolving proteins into homologous families. - Cheong Xin Chan; Maisarah Mahbob; Mark A. Ragan (BMC Bioinform., 2013)

Alignment-free inference of hierarchical and reticulate phylogenomic relationships. - Guillaume Bernard 003; Cheong Xin Chan; Yao-ban Chan; Xin-Yi Chua; Yingnan Cong; James M. Hogan; Stefan R. Maetschke; Mark A. Ragan (Briefings Bioinform., 2019)

Commonly misunderstood parameters of NCBI BLAST and important considerations for users. - Raúl A González-Pech; Timothy G. Stephens; Cheong Xin Chan (Bioinform., 2019)