Overlapping genes in vertebrate genomes. - Izabela Makalowska; Chiao-Feng Lin; Wojciech Makalowski (Comput. Biol. Chem., 2005)

DRAW+SneakPeek: Analysis workflow and quality metric management for DNA-seq experiments. - Chiao-Feng Lin; Otto Valladares; Daniel M. Childress; Egor Klevak; Evan T. Geller; Yih-Chii Hwang; Ellen A. Tsai; Gerard D. Schellenberg; Li-San Wang (Bioinform., 2013)

HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements. - Yih-Chii Hwang; Chiao-Feng Lin; Otto Valladares; John Malamon; Pavel P. Kuksa; Qi Zheng; Brian D. Gregory; Li-San Wang (Bioinform., 2015)