Fractal Dimensions for Percolation and Phase Transition Models: Theory and New Monte Carlo Calculation Method. - Chin-Kun Hu (Fractals in the Natural and Applied Sciences, 1993)

Multicanonical parallel simulations of proteins with continuous potentials. - Shura Hayryan; Chin-Kun Hu; Shun-Yun Hu; Rung-Ji Shang (J. Comput. Chem., 2001)

Parallel Solution of the Poisson-Boltzmann Equation for Proteins. - Shura Hayryan; Chin-Kun Hu; Edik Hayryan; Imrich Pokorný (International Conference on Computational Science, 2003)

ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations. - Ján Busa; Jozef Dzurina; Edik Hayryan; Shura Hayryan; Chin-Kun Hu; Ján Plávka; Imrich Pokorný; Jaroslav Skrivánek; Ming-Chya Wu (Comput. Phys. Commun., 2005)

A new analytical method for computing solvent-accessible surface area of macromolecules and its gradients. - Shura Hayryan; Chin-Kun Hu; Jaroslav Skrivánek; Edik Hayryan; Imrich Pokorný (J. Comput. Chem., 2005)

An enhanced version of SMMP - open-source software package for simulation of proteins. - Frank Eisenmenger; Ulrich H. E. Hansmann; Shura Hayryan; Chin-Kun Hu (Comput. Phys. Commun., 2006)

Spiking and Bursting in Josephson Junction. - Syamal Kumar Dana; Dipendra Chandra Sengupta; Chin-Kun Hu (IEEE Trans. Circuits Syst. II Express Briefs, 2006)

Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations. - Ruben Ghulghazaryan; Shura Hayryan; Chin-Kun Hu (J. Comput. Chem., 2007)

Hydrophobic condensation and modular assembly model of protein folding. - Tian-Yow Tsong; Chin-Kun Hu; Ming-Chya Wu (Biosyst., 2008)

Multiscroll in Coupled Double scroll Type oscillators. - Syamal Kumar Dana; Brajendra K. Singh; Satyabrata Chakraborty; Ram Chandra Yadav; Jürgen Kurths; Gregory V. Osipov; Prodyot Kumar Roy; Chin-Kun Hu (Int. J. Bifurc. Chaos, 2008)

Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes. - Ján Busa; Shura Hayryan; Chin-Kun Hu; Jaroslav Skrivánek; Ming-Chya Wu (J. Comput. Chem., 2009)

CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins. - Ján Busa; Shura Hayryan; Chin-Kun Hu; Jaroslav Skrivánek; Ming-Chya Wu (Comput. Phys. Commun., 2010)

Constructive role of noise in p53 regulatory network. - Yao-Chen Hung; Chin-Kun Hu (Comput. Phys. Commun., 2011)

ARVO-CL: The OpenCL version of the ARVO package - An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations. - Ján Busa Jr.; Shura Hayryan; Ming-Chya Wu; Ján Busa; Chin-Kun Hu (Comput. Phys. Commun., 2012)

A spherical harmonic transform spectral analysis of a localized surface plasmon on a gold nano shell. - Dan Berco; Chin-Kun Hu (J. Comput. Chem., 2014)

Transformation between α-helix and β-sheet structures of one and two polyglutamine peptides in explicit water molecules by replica-exchange molecular dynamics simulations. - Hsin-Lin Chiang; Chun-Jung Chen; Hisashi Okumura; Chin-Kun Hu (J. Comput. Chem., 2014)

CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins. - Ján Busa Jr.; Ján Busa; Shura Hayryan; Chin-Kun Hu; Ming-Chya Wu (Comput. Phys. Commun., 2015)

Efficient algorithm for computing exact partition functions of lattice polymer models. - Yu-Hsin Hsieh; Chi-Ning Chen; Chin-Kun Hu (Comput. Phys. Commun., 2016)

Discovery of DNA dyes Hoechst 34580 and 33342 as good candidates for inhibiting amyloid beta formation: in silico and in vitro study. - Nguyen Quoc Thai; Ning-Hsuan Tseng; Mui Thi Vu; Tin Trung Nguyen; Huynh Quang Linh; Chin-Kun Hu; Yun-Ru Chen; Mai Suan Li (J. Comput. Aided Mol. Des., 2016)

PBCAVE: Program for exact classification of the mesh points of a protein with possible internal cavities and its application to Poisson-Boltzmann equation solution. - Ján Busa Jr.; Ján Busa; Edik A. Ayryan; Shura Hayryan; Chin-Kun Hu; Imrich Pokorný; Jaroslav Skrivánek (Comput. Phys. Commun., 2020)