An SVM-based approach for genotyping deletions and insertions with population sequence reads. - Chong Chu; Jin Zhang; Yufeng Wu (ICCABS, 2013)

An SVM-based approach for discovering splicing junctions with RNA-Seq. - Chong Chu; Yufeng Wu (ICCABS, 2014)

SpliceJumper: a classification-based approach for calling splicing junctions from RNA-seq data. - Chong Chu; Xin Li; Yufeng Wu (BMC Bioinform., 2015)

Concod: Accurate consensus-based approach of calling deletions from high-throughput sequencing data. - Xiaodong Zhang; Chong Chu; Yao Zhang; Yufeng Wu; Jingyang Gao (BIBM, 2016)

GAPPadder: A sensitive approach for closing gaps on draft genomes with short sequence reads. - Chong Chu; Xin Li; Yufeng Wu (ICCABS, 2017)

Concod: an effective integration framework of consensus-based calling deletions from next-generation sequencing data. - Lei Cai; Chong Chu; Xiaodong Zhang; Yufeng Wu; Jingyang Gao (Int. J. Data Min. Bioinform., 2017)

HiTea: a computational pipeline to identify non-reference transposable element insertions in Hi-C data. - Dhawal Jain; Chong Chu; Burak Han Alver; Soohyun Lee; Eunjung Alice Lee; Peter J. Park (Bioinform., 2021)

BamSnap: a lightweight viewer for sequencing reads in BAM files. - Minseok Kwon; Soohyun Lee; Michele Berselli; Chong Chu; Peter J. Park (Bioinform., 2021)

Risk prediction model for food safety based on improved random forest integrating virtual sample. - Zhiqiang Geng; Xiaoyan Duan; Jiatong Li; Chong Chu; Yongming Han (Eng. Appl. Artif. Intell., 2022)

Novel IAPSO-LSTM neural network for risk analysis and early warning of food safety. - Zhiqiang Geng; Xintian Wang; Yuangang Jiang; Yongming Han; Bo Ma 007; Chong Chu (Expert Syst. Appl., 2023)

Novel CNN-based transformer integrating Boruta algorithm for production prediction modeling and energy saving of industrial processes. - Yongming Han; Longkun Han; Xinwei Shi; Jun Li; Xiaoyi Huang; Xuan Hu; Chong Chu; Zhiqiang Geng (Expert Syst. Appl., 2024)

USPDB: A novel U-shaped equivariant graph neural network with subgraph sampling for protein-DNA binding site prediction. - Jia Mi; Chang Li; Han Wang; Ying Du; Chong Chu; Jing Wan; Kunfeng Wang (Expert Syst. Appl., 2025)