OSIRIS, an Entirely in-House Developed Drug Discovery Informatics System. - Thomas Sander; Joël Freyss; Modest von Korff; Jacqueline Renée Reich; Christian Rufener (J. Chem. Inf. Model., 2009)

Wikipedia Chemical Structure Explorer: substructure and similarity searching of molecules from Wikipedia. - Peter Ertl; Luc Patiny; Thomas Sander; Christian Rufener; Michaël Zasso (J. Cheminformatics, 2015)

DataWarrior: An Open-Source Program For Chemistry Aware Data Visualization And Analysis. - Thomas Sander; Joël Freyss; Modest von Korff; Christian Rufener (J. Chem. Inf. Model., 2015)