Proline: an efficient and user-friendly software suite for large-scale proteomics. - David Bouyssié; Anne-Marie Hesse; Emmanuelle Mouton-Barbosa; Magali Rompais; Charlotte Macron; Christine Carapito; Anne Gonzalez de Peredo; Yohann Couté; Véronique Dupierris; Alexandre Burel; Jean-Philippe Menetrey; Andrea Kalaitzakis; et al. (Bioinform., 2020)

Accounting for multiple imputation-induced variability for differential analysis in mass spectrometry-based label-free quantitative proteomics. - Marie Chion; Christine Carapito; Frédéric Bertrand (PLoS Comput. Biol., 2022)

Updated MS²PIP web server supports cutting-edge proteomics applications. - Arthur Declercq; Robbin Bouwmeester; Cristina Chiva; Eduard Sabidó; Aurélie Hirschler; Christine Carapito; Lennart Martens; Sven Degroeve; Ralf Gabriels (Nucleic Acids Res., 2023)