NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei. - Axel Poulet; Ignacio Arganda-Carreras; David Legland; Aline V. Probst; Philippe Andrey; Christophe Tatout (Bioinform., 2015)

Mathematical Modelling of Ground Truth Image for 3D Microscopic Objects Using Cascade of Convolutional Neural Networks Optimized with Parameters' Combinations Generators. - Omar Bilalovic; Zikrija Avdagic; Samir Omanovic; Ingmar Besic; Vedad Letic; Christophe Tatout (Symmetry, 2020)

NODeJ: an ImageJ plugin for 3D segmentation of nuclear objects. - Tristan Dubos; Axel Poulet; Geoffrey Thomson; Emilie Péry; Frédéric Chausse; Christophe Tatout; Sophie Desset; Josien C. van Wolfswinkel; Yannick Jacob (BMC Bioinform., 2022)