Improving Active Contours for Segmentation and Tracking of Motile Cells in Videomicroscopy. - Christophe Zimmer; Elisabeth Labruyere; Vannary Meas-Yedid; Nancy Guillen; Jean-Christophe Olivo-Marin (ICPR (2), 2002)

Quantitative analysis of cellular shape and motility with improved active contours. - Christophe Zimmer; Elisabeth Labruyere; Vannary Meas-Yedid; Nancy Guillen; Jean-Christophe Olivo-Marin (ISBI, 2002)

Segmentation and Tracking of Migrating Cells in Videomicroscopy with Parametric Active Contours: A Tool for Cell-Based Drug Testing. - Christophe Zimmer; Elisabeth Labruyere; Vannary Meas-Yedid; Nancy Guillen; Jean-Christophe Olivo-Marin (IEEE Trans. Medical Imaging, 2002)

A Deconvolution Method for Confocal Microscopy with Total Variation Regularization. - Nicolas Dey; Laure Blanc-Féraud; Josiane Zerubia; Christophe Zimmer; Jean-Christophe Olivo-Marin; Zvi Kam (ISBI, 2004)

Tracking Fluorescent Cells With Coupled Geometric Active Contours. - Christophe Zimmer; Jean-Christophe Olivo-Marin; Bo Zhang 017 (ISBI, 2004)

Coupled Parametric Active Contours. - Christophe Zimmer; Jean-Christophe Olivo-Marin (IEEE Trans. Pattern Anal. Mach. Intell., 2005)

Segmenting and Tracking Fluorescent Cells in Dynamic 3-D Microscopy With Coupled Active Surfaces. - Alexandre Dufour; V. Shinin; S. Tajbakhsh; N. Guillen-Aghion; Jean-Christophe Olivo-Marin; Christophe Zimmer (IEEE Trans. Image Process., 2005)

Biophysical Active Contours for Cell Tracking I: Tension and Bending. - Jacques Pecreaux; Christophe Zimmer; Jean-Christophe Olivo-Marin (ICIP, 2006)

Automated super-resolution detection of fluorescent rods in 2D. - Bo Zhang 017; Jost Enninga; Jean-Christophe Olivo-Marin; Christophe Zimmer (ISBI, 2006)

On the digital trail of mobile cells. - Christophe Zimmer; Bo Zhang 017; Alexandre Dufour; Ayméric Thébaud; Sylvain Berlemont; Vannary Meas-Yedid; Jean-Christophe Olivo-Marin (IEEE Signal Process. Mag., 2006)

Improving single particle localization with an empirically calibrated Gaussian kernel. - Marcio de Moraes Marim; Bo Zhang 017; Jean-Christophe Olivo-Marin; Christophe Zimmer (ISBI, 2008)

Filling annotation gaps in yeast genomes using genome-wide contact maps. - Hervé Marie-Nelly; Martial Marbouty; Axel Cournac; Gianni Liti; Gilles Fischer; Christophe Zimmer; Romain Koszul (Bioinform., 2014)

ImJoy: an open-source computational platform for the deep learning era. - Wei Ouyang 001; Florian Mueller; Martin Hjelmare; Emma Lundberg; Christophe Zimmer (CoRR, 2019)

From Small Scales to Large Scales: Distance-to-Measure Density based Geometric Analysis of Complex Data. - Katharina Proksch; Christoph Alexander Weikamp; Thomas Staudt; Benoît Lelandais; Christophe Zimmer (J. Mach. Learn. Res., 2024)