Bayesian estimation for percolation models of disease spread in plant populations. - Gavin J. Gibson; Wilfred Otten; João A. N. Filipe; Alex R. Cook; Glenn Marion; Christopher A. Gilligan (Stat. Comput., 2006)

Biologica invasion in soil: Complex network analysis. - Francisco J. Pérez-Reche; Sergei N. Taraskin; Franco M. Neri; Christopher A. Gilligan; Luciano da F. Costa; Matheus P. Viana; Wilfred Otten; D. Grinev (DPS, 2009)

Epidemics in Anisotropic Networks of Roots. - T. P. Handford; Francisco J. Pérez-Reche; Sergei N. Taraskin; Luciano da Fontoura Costa; Mauro Miazaki; Franco M. Neri; Christopher A. Gilligan (CompleNet, 2010)

The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System. - Franco M. Neri; Anne Bates; Winnie S. Füchtbauer; Francisco J. Pérez-Reche; Sergei N. Taraskin; Wilfred Otten; Douglas J. Bailey; Christopher A. Gilligan (PLoS Comput. Biol., 2011)

Landscape Epidemiology and Control of Pathogens with Cryptic and Long-Distance Dispersal: Sudden Oak Death in Northern Californian Forests. - João A. N. Filipe; Richard C. Cobb; Ross K. Meentemeyer; Christopher A. Lee 002; Yana S. Valachovic; Alex R. Cook; David M. Rizzo; Christopher A. Gilligan (PLoS Comput. Biol., 2012)

Durable Resistance to Crop Pathogens: An Epidemiological Framework to Predict Risk under Uncertainty. - Giovanni Lo Iacono; Frank van den Bosch; Chris A. Gilligan (PLoS Comput. Biol., 2013)

Rasterising Epidemiological Host Data Efficiently. - Matthew Patrick; Richard O. J. H. Stutt; Christopher A. Gilligan (UKSim, 2014)

Cost-Effective Control of Plant Disease When Epidemiological Knowledge Is Incomplete: Modelling Bahia Bark Scaling of Citrus. - Nik J. Cunniffe; Francisco F. Laranjeira; Franco M. Neri; R. Erik DeSimone; Christopher A. Gilligan (PLoS Comput. Biol., 2014)

Bayesian Analysis for Inference of an Emerging Epidemic: Citrus Canker in Urban Landscapes. - Franco M. Neri; Alex R. Cook; Gavin J. Gibson; Tim R. Gottwald; Christopher A. Gilligan (PLoS Comput. Biol., 2014)

Optimising and Communicating Options for the Control of Invasive Plant Disease When There Is Epidemiological Uncertainty. - Nik J. Cunniffe; Richard O. J. H. Stutt; R. Erik DeSimone; Tim R. Gottwald; Christopher A. Gilligan (PLoS Comput. Biol., 2015)

Testing stochastic software using pseudo-oracles. - Matthew Patrick; Andrew P. Craig; Nik J. Cunniffe; Matthew Parry; Christopher A. Gilligan (ISSTA, 2016)

Automatic test image generation using procedural noise. - Matthew Patrick; Matthew D. Castle; Richard O. J. H. Stutt; Christopher A. Gilligan (ASE, 2016)

Software testing in a scientific research group. - Matthew Patrick; James Elderfield; Richard O. J. H. Stutt; Andrew Rice; Christopher A. Gilligan (SAC, 2016)

Detecting Presymptomatic Infection Is Necessary to Forecast Major Epidemics in the Earliest Stages of Infectious Disease Outbreaks. - Robin N. Thompson; Christopher A. Gilligan; Nik J. Cunniffe (PLoS Comput. Biol., 2016)

A Toolkit for Testing Stochastic Simulations against Statistical Oracles. - Matthew Patrick; Ruairi Donnelly; Christopher A. Gilligan (ICST, 2017)

Dynamical network models for cattle trade: towards economy-based epidemic risk assessment. - Patrick Hoscheit; Sébastien Geeraert; Gaël Beaunée; Hervé Monod; Christopher A. Gilligan; João A. N. Filipe; Elisabeta Vergu; Mathieu Moslonka-Lefebvre (J. Complex Networks, 2017)

Spatial dynamics and control of a crop pathogen with mixed-mode transmission. - Christopher Finn McQuaid; Frank van den Bosch; Anna Szyniszewska; Titus Alicai; Anthony Pariyo; Patrick Chiza Chikoti; Christopher A. Gilligan (PLoS Comput. Biol., 2017)

Control fast or control smart: When should invading pathogens be controlled? - Robin N. Thompson; Christopher A. Gilligan; Nik J. Cunniffe (PLoS Comput. Biol., 2018)

Estimating epidemiological parameters from experiments in vector access to host plants, the method of matching gradients. - Ruairi Donnelly; Geofrey W. Sikazwe; Christopher A. Gilligan (PLoS Comput. Biol., 2020)

Computational models to improve surveillance for cassava brown streak disease and minimize yield loss. - Alex C. Ferris; Richard O. J. H. Stutt; David Godding; Christopher A. Gilligan (PLoS Comput. Biol., 2020)

A new method for the analysis of access period experiments, illustrated with whitefly-borne cassava mosaic begomovirus. - Ruairi Donnelly; Christopher A. Gilligan (PLoS Comput. Biol., 2023)

Modelling the spread and mitigation of an emerging vector-borne pathogen: Citrus greening in the U.S. - Viet-Anh Nguyen; David W. Bartels; Christopher A. Gilligan (PLoS Comput. Biol., 2023)

A framework for modelling desert locust population dynamics and large-scale dispersal. - Renata Retkute; William Thurston; Keith Cressman; Christopher A. Gilligan (PLoS Comput. Biol., 2024)