Biospark: scalable analysis of large numerical datasets from biological simulations and experiments using Hadoop and Spark. - Max Klein; Rati Sharma; Christopher Herrick Bohrer; Cameron M. Avelis; Elijah Roberts (Bioinform., 2017)

A spatially resolved stochastic model reveals the role of supercoiling in transcription regulation. - Yuncong Geng; Christopher Herrick Bohrer; Nicolás Yehya; Hunter Hendrix; Lior I. Shachaf; Jian Liu; Jie Xiao; Elijah Roberts (PLoS Comput. Biol., 2022)