An automated workflow for parallel processing of large multiview SPIM recordings. - Christopher Schmied; Peter Steinbach; Tobias Pietzsch; Stephan Preibisch; Pavel Tomancak (Bioinform., 2016)

Effective image visualization for publications - a workflow using open access tools and concepts. - Christopher Schmied; Helena Klara Jambor (F1000Research, 2020)

SynActJ: Easy-to-Use Automated Analysis of Synaptic Activity. - Christopher Schmied; Tolga Soykan; Svenja Bolz; Volker Haucke; Martin Lehmann (Frontiers Comput. Sci., 2021)

LABKIT: Labeling and Segmentation Toolkit for Big Image Data. - Matthias Arzt; Joran Deschamps; Christopher Schmied; Tobias Pietzsch; Deborah Schmidt; Pavel Tomancak; Robert Haase 001; Florian Jug (Frontiers Comput. Sci., 2022)

Semisupervised Contrastive Learning for Bioactivity Prediction Using Cell Painting Image Data. - David Bushiri Pwesombo; Carsten Beese; Christopher Schmied; Han Sun (J. Chem. Inf. Model., 2025)