An optimization approach to detect differentially methylated regions from Whole Genome Bisulfite Sequencing data. - Nina Hesse; Christopher Schröder 002; Sven Rahmann (PeerJ Prepr., 2015)

Efficient duplicate rate estimation from subsamples of sequencing libraries. - Christopher Schröder 002; Sven Rahmann (PeerJ Prepr., 2015)

A hybrid parameter estimation algorithm for beta mixtures and applications to methylation state classification. - Christopher Schröder 002; Sven Rahmann (Algorithms Mol. Biol., 2017)

Bioinformatics from genetic variants to methylation - Christopher Schröder 002 (2018)

wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data. - Marius Wöste; Elsa Leitão; Sandra Laurentino; Bernhard Horsthemke; Sven Rahmann; Christopher Schröder 002 (BMC Bioinform., 2020)

Insane in the vembrane: filtering and transforming VCF/BCF files. - Till Hartmann; Christopher Schröder 002; Elias Kuthe; David Laehnemann; Johannes Köster (Bioinform., 2023)