Sequence Analysis on a 216-Processor Beowulf Cluster. - Katerina Michalickova; Moyez Dharsee; Christopher W. V. Hogue (Annual Linux Showcase & Conference, 2000)

MoBiDiCK: A Tool for Distributed Computing on the Internet. - Moyez Dharsee; Christopher W. V. Hogue (Heterogeneous Computing Workshop, 2000)

BIND-a data specification for storing and describing biomolecular interactions, molecular complexes and pathways. - Gary D. Bader; Christopher W. V. Hogue (Bioinform., 2000)

VISTRAJ: exploring protein conformational space. - John J. Salama; Howard J. Feldman; Christopher W. V. Hogue (Bioinform., 2001)

BIND - The Biomolecular Interaction Network Database. - Gary D. Bader; Ian M. Donaldson; Cheryl Wolting; B. F. Francis Ouellette; Tony Pawson; Christopher W. V. Hogue (Nucleic Acids Res., 2001)

Bioinformatics: Interaction Databases. - Gary D. Bader; Christopher W. V. Hogue (Essentials of Genomics and Bioinformatics, 2002)

Kangaroo - A pattern-matching program for biological sequences. - Doron Betel; Christopher W. V. Hogue (BMC Bioinform., 2002)

NBLAST: a cluster variant of BLAST for NxN comparisons. - Michel Dumontier; Christopher W. V. Hogue (BMC Bioinform., 2002)

Species-specific protein sequence and fold optimizations. - Michel Dumontier; Katerina Michalickova; Christopher W. V. Hogue (BMC Bioinform., 2002)

SeqHound: biological sequence and structure database as a platform for bioinformatics research. - Katerina Michalickova; Gary D. Bader; Michel Dumontier; Hao Lieu; Doron Betel; Ruth Isserlin; Christopher W. V. Hogue (BMC Bioinform., 2002)

An automated method for finding molecular complexes in large protein interaction networks. - Gary D. Bader; Christopher W. V. Hogue (BMC Bioinform., 2003)

PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine. - Ian M. Donaldson; Joel D. Martin; Berry de Bruijn; Cheryl Wolting; Vicki Lay; Brigitte Tuekam; Shudong Zhang; Berivan Baskin; Gary D. Bader; Katerina Michalickova; Tony Pawson; Christopher W. V. Hogue (BMC Bioinform., 2003)

BIND: the Biomolecular Interaction Network Database. - Gary D. Bader; Doron Betel; Christopher W. V. Hogue (Nucleic Acids Res., 2003)

Hardware Accelerated Novel Protein Identification. - Anish Alex; Jonathan Rose; Ruth Isserlin-Weinberger; Christopher W. V. Hogue (FPL, 2004)

Analysis of domain correlations in yeast protein complexes. - Doron Betel; Ruth Isserlin-Weinberger; Christopher W. V. Hogue (ISMB/ECCB (Supplement of Bioinformatics), 2004)

MyMed: A database system for biomedical research on MEDLINE data. - Kimberly N. Lewis; Mark D. Robinson; Timothy R. Hughes; Christopher W. V. Hogue (IBM Syst. J., 2004)

Generation of Glyphs for Conveying Complex Information, with Application to Protein Representations. - Greg Pintilie; Brigitte Tuekam; Christopher W. V. Hogue (Smart Graphics, 2005)

The Biomolecular Interaction Network Database and related tools 2005 update. - C. Alfarano; C. E. Andrade; K. Anthony; N. Bahroos; Martha Bajec; K. Bantoft; Doron Betel; B. Bobechko; K. Boutilier; E. Burgess; K. Buzadzija; R. Cavero; et al. (Nucleic Acids Res., 2005)

Domain-based small molecule binding site annotation. - Kevin A. Snyder; Howard J. Feldman; Michel Dumontier; John J. Salama; Christopher W. V. Hogue (BMC Bioinform., 2006)

Structure-Templated Predictions of Novel Protein Interactions from Sequence Information. - Doron Betel; Kevin E. Breitkreuz; Ruth Isserlin; Danielle Dewar-Darch; Mike Tyers; Christopher W. V. Hogue (PLoS Comput. Biol., 2007)

Near-membrane ensemble elongation in the proline-rich LRP6 intracellular domain may explain the mysterious initiation of the Wnt signaling pathway. - Chengcheng Liu; Mingxi Yao; Christopher W. V. Hogue (BMC Bioinform., 2011)

Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain - Implication in Mechanosensing. - Kinya Hotta; Soumya Ranganathan; Ruchuan Liu; Fei Wu 019; Hiroaki Machiyama; Rong Gao; Hiroaki Hirata; Neelesh Soni; Takashi Ohe; Christopher W. V. Hogue; M. S. Madhusudhan 001; Yasuhiro Sawada (PLoS Comput. Biol., 2014)

De novo Ensemble Modeling Suggests that AP2-Binding to Disordered Regions Can Increase StericVolume of Epsin but Not Eps15. - N. Suhas Jagannathan; Christopher W. V. Hogue; Lisa Tucker-Kellogg (PSB, 2020)

Computational modeling suggests binding-induced expansion of Epsin disordered regions upon association with AP2. - N. Suhas Jagannathan; Christopher W. V. Hogue; Lisa Tucker-Kellogg (PLoS Comput. Biol., 2021)