Segmentation and mapping of highly convoluted contours with applications to medical images. - Christos Davatzikos; Jerry L. Prince (ICASSP, 1992)

Adaptive active contour algorithms for extracting and mapping thick curves. - Christos Davatzikos; Jerry L. Prince (CVPR, 1993)

An active contour model for mapping the cortex. - Christos Davatzikos; Jerry L. Prince (IEEE Trans. Medical Imaging, 1995)

Morphological Analysis of Brain Structures Using Spatial Normalization. - Christos Davatzikos; Marc Vaillant; Susan M. Resnick; Jerry L. Prince; Stanley Letovsky; R. Nick Bryan (VBC, 1996)

Using a deformable surface model to obtain a shape representation of the cortex. - Christos Davatzikos; R. Nick Bryan (IEEE Trans. Medical Imaging, 1996)

Image registration based on boundary mapping. - Christos Davatzikos; Jerry L. Prince; R. Nick Bryan (IEEE Trans. Medical Imaging, 1996)

A path-planning algorithm for image-guided neurosurgery. - Marc Vaillant; Christos Davatzikos; Russell H. Taylor; R. Nick Bryan (CVRMed, 1997)

Mapping the Cerebral Sulci: Application to Morphological Analysis of the Cortex and to Non-rigid Registration. - Marc Vaillant; Christos Davatzikos (IPMI, 1997)

Spatial Transformation and Registration of Brain Images Using Elastically Deformable Models. - Christos Davatzikos (Comput. Vis. Image Underst., 1997)

Finding parametric representations of the cortical sulci using an active contour model. - Marc Vaillant; Christos Davatzikos (Medical Image Anal., 1997)

A Biomechanical Model of Soft Tissue Deformation, with Applications to Non-rigid Registration of Brain Images with Tumor Pathology. - Stelios K. Kyriacou; Christos Davatzikos (MICCAI, 1998)

Hierarchical Matching of Cortical Features for Deformable Brain Image Registration. - Marc Vaillant; Christos Davatzikos (IPMI, 1999)

Mining Lesion-Deficit Associations in a Brain Image Database. - Vasileios Megalooikonomou; Christos Davatzikos; Edward Herskovits (KDD, 1999)

Convexity analysis of active contour problems. - Christos Davatzikos; Jerry L. Prince (Image Vis. Comput., 1999)

Nonlinear elastic registration of brain images with tumor pathology using a biomechanical model [MRI]. - Stelios K. Kyriacou; Christos Davatzikos; S. James Zinreich; R. Nick Bryan (IEEE Trans. Medical Imaging, 1999)

A Framework for Predictive Modeling of Intra-operative Deformations: A Simulation-Based Study. - Stelios K. Kyriacou; Dinggang Shen; Christos Davatzikos (MICCAI, 2000)

Adaptive-Focus Statistical Shape Model for Segmentation of 3D MR Structures. - Dinggang Shen; Christos Davatzikos (MICCAI, 2000)

An Adaptive-Focus Deformable Model Using Statistical and Geometric Information. - Dinggang Shen; Christos Davatzikos (IEEE Trans. Pattern Anal. Mach. Intell., 2000)

Statistically Optimized Biopsy Strategy for the Diagnosis of Prostate Cancer. - Dinggang Shen; Zhiqiang Lao; Edward Herskovits; Gabor Fichtinger; Christos Davatzikos; Jianchao Zeng 002 (CBMS, 2001)

Statistical Study on Cortical Sulci of Human Brains. - Xiaodong Tao; Xiao Han 007; Maryam E. Rettmann; Jerry L. Prince; Christos Davatzikos (IPMI, 2001)

A Statistical Atlas of Prostate Cancer for Optimal Biopsy. - Dinggang Shen; Zhiqiang Lao; Jianchao Zeng 002; Edward Herskovits; Gabor Fichtinger; Christos Davatzikos (MICCAI, 2001)

Measuring biological shape using geometry-based shape transformations. - Christos Davatzikos; Max A. Viergever (Image Vis. Comput., 2001)

Voxel-Based Morphometry Using the RAVENS Maps: Methods and Validation Using Simulated Longitudinal Atrophy. - Christos Davatzikos; Ahmet Genc; Dongrong Xu; Susan M. Resnick (NeuroImage, 2001)

A Framework for Predictive Modeling of Anatomical Deformations. - Christos Davatzikos; Dinggang Shen; Ashraf Mohamed; Stelios K. Kyriacou (IEEE Trans. Medical Imaging, 2001)

An Adaptive-Focus Statistical Shape Model for Segmentation and Shape Modeling of 3D Brain Structures. - Dinggang Shen; Edward Herskovits; Christos Davatzikos (IEEE Trans. Medical Imaging, 2001)

Statistical shape model for automatic skull-stripping of brain images. - Zhiqiang Lao; Dinggang Shen; Christos Davatzikos (ISBI, 2002)

Bayesian clustering methods for morphological analysis of MR images. - Hanchuan Peng; Edward Herskovits; Christos Davatzikos (ISBI, 2002)

Statistically-based reorientation of diffusion tensor field. - Dongrong Xu; Susumu Mori; Dinggang Shen; Christos Davatzikos (ISBI, 2002)

Automatic segmentation of white matter lesions in T1-weighted brain MR images. - Songyang Yu; Dzung L. Pham; Dinggang Shen; Edward Herskovits; Susan M. Resnick; Christos Davatzikos (ISBI, 2002)

A Combined Statistical and Biomechanical Model for Estimation of Intra-operative Prostate Deformation. - Ashraf Mohamed; Christos Davatzikos; Russell H. Taylor (MICCAI (2), 2002)

Measuring Size and Shape of the Hippocampus in MR Images Using a Deformable Shape Model. - Dinggang Shen; Scott Moffat; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2002)

A Framework for Callosal Fiber Distribution Analysis. - Dongrong Xu; Susumu Mori; Meiyappan Solaiyappan; Peter C. M. van Zijl; Christos Davatzikos (NeuroImage, 2002)

HAMMER: Heirarchical Attribute Matching Mechanism for Elastic Registration. - Dinggang Shen; Christos Davatzikos (IEEE Trans. Medical Imaging, 2002)

Using a Statistical Shape Model to Extract Sulcal Curves on the Outer Cortex of the Human Brain. - Xiaodong Tao; Jerry L. Prince; Christos Davatzikos (IEEE Trans. Medical Imaging, 2002)

Topology Preservation and Regularity in Estimated Deformation Fields. - Bilge Karaçali; Christos Davatzikos (IPMI, 2003)

Correspondence Detection Using Wavelet-Based Attribute Vectors. - Zhong Xue; Dinggang Shen; Christos Davatzikos (MICCAI (2), 2003)

Automatic classification of sulcal regions of the human brain cortex using pattern recognition. - Kirsten Judith Behnke; Maryam E. Rettmann; Dzung L. Pham; Dinggang Shen; Susan M. Resnick; Christos Davatzikos; Jerry L. Prince (Image Processing, 2003)

Very High-Resolution Morphometry Using Mass-Preserving Deformations and HAMMER Elastic Registration. - Dinggang Shen; Christos Davatzikos (NeuroImage, 2003)

Hierarchical Active Shape Models, Using the Wavelet Transform. - Christos Davatzikos; Xiaodong Tao; Dinggang Shen (IEEE Trans. Medical Imaging, 2003)

Segmentation of Prostate Boundaries from Ultrasound Images Using Statistical Shape Model. - Dinggang Shen; Yiqiang Zhan; Christos Davatzikos (IEEE Trans. Medical Imaging, 2003)

Morphological Classification of Medical Images using Nonlinear Support Vector Machines. - Christos Davatzikos; Dinggang Shen; Zhiqiang Lao; Zhong Xue; Bilge Karaçali (ISBI, 2004)

Predictive Modeling of Anatomic Structures Using Canonical Correlation Analysis. - Tianming Liu 001; Dinggang Shen; Christos Davatzikos (ISBI, 2004)

Finite Element Mesh Generation and Remeshing from Segmented Medical Images. - Ashraf Mohamed; Christos Davatzikos (ISBI, 2004)

An Automated Method for Finding Curves of Sulcal Fundi On Human Cortical Surfaces. - Xiaodong Tao; Jerry L. Prince; Christos Davatzikos (ISBI, 2004)

Matching of Diffusion Tensor Images using Gabor Features. - Ragini Verma; Christos Davatzikos (ISBI, 2004)

Deformable Registration of Tumor-Diseased Brain Images. - Tianming Liu 001; Dinggang Shen; Christos Davatzikos (MICCAI (1), 2004)

Shape Representation via Best Orthogonal Basis Selection. - Ashraf Mohamed; Christos Davatzikos (MICCAI (1), 2004)

Optimized prostate biopsy via a statistical atlas of cancer spatial distribution. - Dinggang Shen; Zhiqiang Lao; Jianchao Zeng 002; Wei Zhang 090; Isabell A. Sesterhenn; Leon Sun; Judd W. Moul; Edward Herskovits; Gabor Fichtinger; Christos Davatzikos (Medical Image Anal., 2004)

Why voxel-based morphometric analysis should be used with great caution when characterizing group differences. - Christos Davatzikos (NeuroImage, 2004)

Morphological classification of brains via high-dimensional shape transformations and machine learning methods. - Zhiqiang Lao; Dinggang Shen; Zhong Xue; Bilge Karaçali; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2004)

Deformable registration of cortical structures via hybrid volumetric and surface warping. - Tianming Liu 001; Dinggang Shen; Christos Davatzikos (NeuroImage, 2004)

Measuring temporal morphological changes robustly in brain MR images via 4-dimensional template warping. - Dinggang Shen; Christos Davatzikos (NeuroImage, 2004)

Automated morphometric study of brain variation in XXY males. - Dinggang Shen; Dengfeng Liu; Hong Liu; Liv S. Clasen; Jay N. Giedd; Christos Davatzikos (NeuroImage, 2004)

A Bayesian morphometry algorithm. - Edward Herskovits; Hanchuan Peng; Christos Davatzikos (IEEE Trans. Medical Imaging, 2004)

Estimating topology preserving and smooth displacement fields. - Bilge Karaçali; Christos Davatzikos (IEEE Trans. Medical Imaging, 2004)

Determining correspondence in 3-D MR brain images using attribute vectors as morphological signatures of voxels. - Zhong Xue; Dinggang Shen; Christos Davatzikos (IEEE Trans. Medical Imaging, 2004)

Classification of Structural Images via High-Dimensional Image Warping, Robust Feature Extraction, and SVM. - Yong Fan 001; Dinggang Shen; Christos Davatzikos (MICCAI, 2005)

Finite Element Modeling of Brain Tumor Mass-Effect from 3D Medical Images. - Ashraf Mohamed; Christos Davatzikos (MICCAI, 2005)

Deformable Registration of Brain Tumor Images Via a Statistical Model of Tumor-Induced Deformation. - Ashraf Mohamed; Dinggang Shen; Christos Davatzikos (MICCAI (2), 2005)

Using the Fast Marching Method to Extract Curves with Given Global Properties. - Xiaodong Tao; Christos Davatzikos; Jerry L. Prince (MICCAI (2), 2005)

Statistical Representation and Simulation of High-Dimensional Deformations: Application to Synthesizing Brain Deformations. - Zhong Xue; Dinggang Shen; Bilge Karaçali; Christos Davatzikos (MICCAI (2), 2005)

Classifying spatial patterns of brain activity with machine learning methods: Application to lie detection. - Christos Davatzikos; Kosha Ruparel; Yong Fan 001; Dinggang Shen; M. Acharyya; James Loughead; Ruben C. Gur; Daniel D. Langleben (NeuroImage, 2005)

Spatiotemporal maturation patterns of murine brain quantified by diffusion tensor MRI and deformation-based morphometry. - Ragini Verma; Susumu Mori; Dinggang Shen; Paul Yarowsky; Jiangyang Zhang; Christos Davatzikos (Proc. Natl. Acad. Sci. USA, 2005)

Detecting Cognitive States from fMRI Images by Machine Learning and Multivariate Classification. - Yong Fan 001; Dinggang Shen; Christos Davatzikos (CVPR Workshops, 2006)

On Characterizing and Analyzing Diffusion Tensor Images by Learning their Underlying Manifold Structure. - Parmeshwar Khurd; Ragini Verma; Christos Davatzikos (CVPR Workshops, 2006)

A Joint Transformation and Residual Image Descriptor for Morphometric Image Analysis using an Equivalence Class Formulation. - Sokratis Makrogiannis; Ragini Verma; Bilge Karaçali; Christos Davatzikos (CVPR Workshops, 2006)

Statistically-Constrained High-Dimensional Warping Using Wavelet-Based Priors. - Zhong Xue; Dinggang Shen; Christos Davatzikos (CVPR Workshops, 2006)

Diagnosis of Brain Abnormality Using both Structural and Functional MR Images. - Yong Fan 001; Hengyi Rao; Joan M. Giannetta; Hallam Hurt; Jiongjiong Wang; Christos Davatzikos; Dinggang Shen (EMBC, 2006)

Correspondence detection in diffusion tensor images. - Christos Davatzikos; Feby Abraham; George Biros; Ragini Verma (ISBI, 2006)

Automated segmentation of white matter lesions in 3D brain MR images, using multivariate pattern classification. - Zhiqiang Lao; Dinggang Shen; Abbas Jawad; Bilge Karaçali; Dengfeng Liu; Elias R. Melhem; R. Nick Bryan; Christos Davatzikos (ISBI, 2006)

Estimating myocardial fiber orientations by template warping. - Hari Sundar; Dinggang Shen; George Biros; Harold Litt; Christos Davatzikos (ISBI, 2006)

Manifold based analysis of diffusion tensor images using isomaps. - Ragini Verma; Christos Davatzikos (ISBI, 2006)

Registration of brain images with tumors: towards the construction of statistical atlases for therapy planning. - Evangelia I. Zacharaki; Dinggang Shen; Ashraf Mohamed; Christos Davatzikos (ISBI, 2006)

Registering Histological and MR Images of Prostate for Image-Based Cancer Detection. - Yiqiang Zhan; Michael D. Feldman; John Tomaszewski 001; Christos Davatzikos; Dinggang Shen (MICCAI (2), 2006)

A novel 2D-3D registration algorithm for aligning fluoro images with 3D pre-op CT/MR images. - Hari Sundar; Ali Khamene; Chenyang Xu 001; Frank Sauer; Christos Davatzikos (Image-Guided Procedures, 2006)

Deformable registration of brain tumor images via a statistical model of tumor-induced deformation. - Ashraf Mohamed; Evangelia I. Zacharaki; Dinggang Shen; Christos Davatzikos (Medical Image Anal., 2006)

Statistical representation of high-dimensional deformation fields with application to statistically constrained 3D warping. - Zhong Xue; Dinggang Shen; Christos Davatzikos (Medical Image Anal., 2006)

CLASSIC: Consistent Longitudinal Alignment and Segmentation for Serial Image Computing. - Zhong Xue; Dinggang Shen; Christos Davatzikos (NeuroImage, 2006)

Simulating deformations of MR brain images for validation of atlas-based segmentation and registration algorithms. - Zhong Xue; Dinggang Shen; Bilge Karaçali; Joshua Stern; David A. Rottenberg; Christos Davatzikos (NeuroImage, 2006)

Simulation of tissue atrophy using a topology preserving transformation model. - Bilge Karaçali; Christos Davatzikos (IEEE Trans. Medical Imaging, 2006)

Manifold Learning Techniques in Image Analysis of High-dimensional Diffusion Tensor Magnetic Resonance Images. - Parmeshwar Khurd; Sajjad Baloch; Ruben C. Gur; Christos Davatzikos; Ragini Verma (CVPR, 2007)

An Anatomical Equivalence Class Based Joint Transformation-Residual Descriptor for Morphological Analysis. - Sajjad Baloch; Ragini Verma; Christos Davatzikos (IPMI, 2007)

Kernel-Based Manifold Learning for Statistical Analysis of Diffusion Tensor Images. - Parmeshwar Khurd; Ragini Verma; Christos Davatzikos (IPMI, 2007)

Probabilistic Segmentation of Brain Tumors Based on Multi-Modality Magnetic Resonance Images. - Hongmin Cai; Ragini Verma; Yangming Ou; Seung-Koo Lee; Elias R. Melhem; Christos Davatzikos (ISBI, 2007)

Modeling Glioma Growth and Mass Effect in 3D MR Images of the Brain. - Cosmina Hogea; Christos Davatzikos; George Biros (MICCAI (1), 2007)

Robust Computation of Mutual Information Using Spatially Adaptive Meshes. - Hari Sundar; Dinggang Shen; George Biros; Chenyang Xu 001; Christos Davatzikos (MICCAI (1), 2007)

Low-constant parallel algorithms for finite element simulations using linear octrees. - Hari Sundar; Rahul S. Sampath; Santi S. Adavani; Christos Davatzikos; George Biros (SC, 2007)

Relations of brain volumes with cognitive function in males 45 years and older with past lead exposure. - Brian S. Schwartz; Sining Chen; Brian Caffo; Walter F. Stewart; Karen I. Bolla; David M. Yousem; Christos Davatzikos (NeuroImage, 2007)

COMPARE: Classification of Morphological Patterns Using Adaptive Regional Elements. - Yong Fan 001; Dinggang Shen; Ruben C. Gur; Raquel E. Gur; Christos Davatzikos (IEEE Trans. Medical Imaging, 2007)

Anatomical Equivalence Class: A Morphological Analysis Framework Using a Lossless Shape Descriptor. - Sokratis Makrogiannis; Ragini Verma; Christos Davatzikos (IEEE Trans. Medical Imaging, 2007)

On Analyzing Diffusion Tensor Images by Identifying Manifold Structure Using Isomaps. - Ragini Verma; Parmeshwar Khurd; Christos Davatzikos (IEEE Trans. Medical Imaging, 2007)

Targeted Prostate Biopsy Using Statistical Image Analysis. - Yiqiang Zhan; Dinggang Shen; Jianchao Zeng 002; Leon Sun; Gabor Fichtinger; Judd W. Moul; Christos Davatzikos (IEEE Trans. Medical Imaging, 2007)

Application of statistical cancer atlas for 3D biopsy. - Ramkrishnan Narayanan; Dinggang Shen; Christos Davatzikos; E. David Crawford; Albaha Barqawi; Priya N. Werahera; Dinesh K. Kumar; Jasjit S. Suri (Image Processing: Algorithms and Systems, 2008)

Application and validation of registration framework for real-time atlas guided biopsy. - Ramkrishnan Narayanan; Dinggang Shen; Christos Davatzikos; E. David Crawford; Albaha Barqawi; Priya N. Werahera; Dinesh K. Kumar; Jasjit S. Suri (ISBI, 2008)

Manifold based Morphometry applied to schizophrenia. - Ragini Verma; Parmeshwar Khurd; James Loughead; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (ISBI, 2008)

Multiparametric tissue abnormality characterization using manifold regularization. - Kayhan N. Batmanghelich; Xiaoying Wu; Evangelia I. Zacharaki; Clyde E. Markowitz; Christos Davatzikos; Ragini Verma (Computer-Aided Diagnosis, 2008)

Diffusion Tensor Image Registration Using Tensor Geometry and Orientation Features. - Jinzhong Yang; Dinggang Shen; Christos Davatzikos; Ragini Verma (MICCAI (2), 2008)

Measuring Brain Lesion Progression with a Supervised Tissue Classification System. - Evangelia I. Zacharaki; Stathis Kanterakis; R. Nick Bryan; Christos Davatzikos (MICCAI (1), 2008)

Anatomical equivalence class based complete morphological descriptor for robust image analysis and abnormality detection. - Sajjad Baloch; Christos Davatzikos (Image-Guided Procedures, 2008)

Feature selection and classification of multiparametric medical images using bagging and SVM. - Yong Fan 001; Susan M. Resnick; Christos Davatzikos (Image Processing, 2008)

3-D statistical cancer atlas-based targeting of prostate biopsy using ultrasound image guidance. - Ramkrishnan Narayanan; Dinggang Shen; Christos Davatzikos; E. David Crawford; Albaha Barqawi; Priya N. Werahera; Dinesh K. Kumar; Jasjit S. Suri (Image Processing, 2008)

Spatial normalization of diffusion tensor images based on anisotropic segmentation. - Jinzhong Yang; Dinggang Shen; Chandan Misra; Xiaoying Wu; Susan M. Resnick; Christos Davatzikos; Ragini Verma (Image Processing, 2008)

Parallel optimization of tumor model parameters for fast registration of brain tumor images. - Evangelia I. Zacharaki; Cosmina S. Hogea; Dinggang Shen; George Biros; Christos Davatzikos (Image Processing, 2008)

T1ρ MRI of Alzheimer's disease. - Arijitt Borthakur; Matthew Sochor; Christos Davatzikos; John Q. Trojanowski; Christopher M. Clark (NeuroImage, 2008)

Individual patient diagnosis of AD and FTD via high-dimensional pattern classification of MRI. - Christos Davatzikos; Susan M. Resnick; X. Wu; P. Parmpi; Christopher M. Clark (NeuroImage, 2008)

Spatial patterns of brain atrophy in MCI patients, identified via high-dimensional pattern classification, predict subsequent cognitive decline. - Yong Fan 001; Nematollah Batmanghelich; Christopher M. Clark; Christos Davatzikos; Alzheimer's Disease Neuroimaging Initiative (NeuroImage, 2008)

Structural and functional biomarkers of prodromal Alzheimer's disease: A high-dimensional pattern classification study. - Yong Fan 001; Susan M. Resnick; Xiaoying Wu; Christos Davatzikos (NeuroImage, 2008)

Brain–Tumor Interaction Biophysical Models for Medical Image Registration. - Cosmina Hogea; Christos Davatzikos; George Biros (SIAM J. Sci. Comput., 2008)

A Comparative Study of Biomechanical Simulators in Deformable Registration of Brain Tumor Images. - Evangelia I. Zacharaki; Cosmina Hogea; George Biros; Christos Davatzikos (IEEE Trans. Biomed. Eng., 2008)

ORBIT: A Multiresolution Framework for Deformable Registration of Brain Tumor Images. - Evangelia I. Zacharaki; Dinggang Shen; Seung-Koo Lee; Christos Davatzikos (IEEE Trans. Medical Imaging, 2008)

Groupwise morphometric analysis based on morphological appearance manifold. - Naixiang Lian; Christos Davatzikos (CVPR Workshops, 2009)

Non-rigid registration between histological and MR images of the prostate: A joint segmentation and registration framework. - Yangming Ou; Dinggang Shen; Michael D. Feldman; John Tomaszewski 001; Christos Davatzikos (CVPR Workshops, 2009)

A General and Unifying Framework for Feature Construction, in Image-Based Pattern Classification. - Nematollah Batmanghelich; Ben Taskar; Christos Davatzikos (IPMI, 2009)

DRAMMS: Deformable Registration via Attribute Matching and Mutual-Saliency Weighting. - Yangming Ou; Christos Davatzikos (IPMI, 2009)

Morphological Appearance Manifolds in Computational Anatomy: Groupwise Registration and Morphological Analysis. - Christos Davatzikos; Naixiang Lian (ISBI, 2009)

MRI-Based Classification of Brain Tumor Type and Grade Using SVM-RFE. - Evangelia I. Zacharaki; Sumei Wang; Sanjeev Chawla; Dong Soo Yoo; Ronald L. Wolf; Elias R. Melhem; Christos Davatzikos (ISBI, 2009)

Efficient Large Deformation Registration via Geodesics on a Learned Manifold of Images. - Jihun Hamm; Christos Davatzikos; Ragini Verma (MICCAI (1), 2009)

Biomechanically-Constrained 4D Estimation of Myocardial Motion. - Hari Sundar; Christos Davatzikos; George Biros (MICCAI (1), 2009)

Sampling the spatial patterns of cancer: Optimized biopsy procedures for estimating prostate cancer volume and Gleason Score. - Yangming Ou; Dinggang Shen; Jianchao Zeng 002; Leon Sun; Judd W. Moul; Christos Davatzikos (Medical Image Anal., 2009)

Morphological appearance manifolds in computational anatomy: Groupwise registration and morphological analysis. - Sajjad Baloch; Christos Davatzikos (NeuroImage, 2009)

Baseline and longitudinal patterns of brain atrophy in MCI patients, and their use in prediction of short-term conversion to AD: Results from ADNI. - Chandan Misra; Yong Fan 001; Christos Davatzikos (NeuroImage, 2009)

Corrigendum to "Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth" [NeuroImage 46 (2009) 762-774]. - Evangelia I. Zacharaki; Cosmina Hogea; Dinggang Shen; George Biros; Christos Davatzikos (NeuroImage, 2009)

Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth. - Evangelia I. Zacharaki; Cosmina Hogea; Dinggang Shen; George Biros; Christos Davatzikos (NeuroImage, 2009)

Application of trace-norm and low-rank matrix decomposition for computational anatomy. - Nematollah Batmanghelich; Ali Gooya; Stathis Kanterakis; Ben Taskar; Christos Davatzikos (CVPR Workshops, 2010)

Learning high-dimensional image statistics for abnormality detection on medical images. - Güray Erus; Evangelia I. Zacharaki; R. Nick Bryan; Christos Davatzikos (CVPR Workshops, 2010)

An EM algorithm for brain tumor image registration: A tumor growth modeling based approach. - Ali Gooya; George Biros; Christos Davatzikos (CVPR Workshops, 2010)

Groupwise morphometric analysis based on high dimensional clustering. - Dong Hye Ye; Kilian M. Pohl; Harold Litt; Christos Davatzikos (CVPR Workshops, 2010)

Automated segmentation of brain lesions by combining intensity and spatial information. - Bilwaj Gaonkar; Güray Erus; R. Nick Bryan; Christos Davatzikos (ISBI, 2010)

Detecting mutually-salient landmark pairs with MRF regularization. - Yangming Ou; Ahmed Besbes; Michel Bilello; Mohamed Mansour; Christos Davatzikos; Nikos Paragios (ISBI, 2010)

Imaging as a Surrogate for the Early Prediction and Assessment of Treatment Response through the Analysis of 4-D Texture Ensembles (ISEPARATE). - Peter Maday; Parmeshwar Khurd; Lance Ladic; Mitchell D. Schnall; Mark Rosen; Christos Davatzikos; Ali Kamen (MCV, 2010)

Simultaneous Geometric - Iconic Registration. - Aristeidis Sotiras; Yangming Ou; Ben Glocker; Christos Davatzikos; Nikos Paragios (MICCAI (2), 2010)

Spatio-temporal Analysis of Brain MRI Images Using Hidden Markov Models. - Ying Wang 003; Susan M. Resnick; Christos Davatzikos (MICCAI (2), 2010)

Optimally-Discriminative Voxel-Based Analysis. - Tianhao Zhang; Christos Davatzikos (MICCAI (2), 2010)

DTI-DROID: Diffusion tensor imaging-deformable registration using orientation and intensity descriptors. - Madhura Ingalhalikar; Jinzhong Yang; Christos Davatzikos; Ragini Verma (Int. J. Imaging Syst. Technol., 2010)

GRAM: A framework for geodesic registration on anatomical manifolds. - Jihun Hamm; Dong Hye Ye; Ragini Verma; Christos Davatzikos (Medical Image Anal., 2010)

High-dimensional pattern regression using machine learning: From medical images to continuous clinical variables. - Ying Wang 003; Yong Fan 001; Priyanka Bhatt; Christos Davatzikos (NeuroImage, 2010)

Multi-parametric analysis and registration of brain tumors: Constructing statistical atlases and diagnostic tools of predictive value. - Christos Davatzikos; Evangelia I. Zacharaki; Ali Gooya; Vanessa Clark (EMBC, 2011)

Morphological Classification: Application to Cardiac MRI of Tetralogy of Fallot. - Dong Hye Ye; Harold Litt; Christos Davatzikos; Kilian M. Pohl (FIMH, 2011)

Disease classification and prediction via semi-supervised dimensionality reduction. - Kayhan N. Batmanghelich; Dong Hye Ye; Kilian M. Pohl; Ben Taskar; Christos Davatzikos (ISBI, 2011)

Statistical atlases and machine learning tools applied to optimized prostate biopsy for cancer detection and estimation of volume and Gleason score. - Christos Davatzikos (ISBI, 2011)

Understanding heterogeneity in normal older adult populations via clustering of longitudinal data. - Roman Filipovych; Susan M. Resnick; Christos Davatzikos (ISBI, 2011)

Automated segmentation of cortical necrosis using awavelet based abnormality detection system. - Bilwaj Gaonkar; Güray Erus; Kilian M. Pohl; Manoj Tanwar; Stefan Margiewicz; R. Nick Bryan; Christos Davatzikos (ISBI, 2011)

Narrow band region-scalable fitting model for image segmentation in the presence of intensity inhomogeneities. - Bei Yan; Chunming Li; Mei Xie; Christos Davatzikos (ISBI, 2011)

Regularized Tensor Factorization for Multi-Modality Medical Image Classification. - Nematollah Batmanghelich; Aoyan Dong; Ben Taskar; Christos Davatzikos (MICCAI (3), 2011)

Multi-Kernel Classification for Integration of Clinical and Imaging Data: Application to Prediction of Cognitive Decline in Older Adults. - Roman Filipovych; Susan M. Resnick; Christos Davatzikos (MLMI, 2011)

Pattern Based Morphometry. - Bilwaj Gaonkar; Kilian M. Pohl; Christos Davatzikos (MICCAI (2), 2011)

Joint Segmentation and Deformable Registration of Brain Scans Guided by a Tumor Growth Model. - Ali Gooya; Kilian M. Pohl; Michel Bilello; George Biros; Christos Davatzikos (MICCAI (2), 2011)

Semi-supervised Pattern Classification: Application to Structural MRI of Alzheimer's Disease. - Dong Hye Ye; Kilian M. Pohl; Christos Davatzikos (PRNI, 2011)

Investigating machine learning techniques for MRI-based classification of brain neoplasms. - Evangelia I. Zacharaki; Vasileios G. Kanas; Christos Davatzikos (Int. J. Comput. Assist. Radiol. Surg., 2011)

Pattern analysis in neuroimaging: Beyond two-class categorization. - Roman Filipovych; Ying Wang 003; Christos Davatzikos (Int. J. Imaging Syst. Technol., 2011)

Morphological appearance manifolds for group-wise morphometric analysis. - Naixiang Lian; Christos Davatzikos (Medical Image Anal., 2011)

DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting. - Yangming Ou; Aristeidis Sotiras; Nikos Paragios; Christos Davatzikos (Medical Image Anal., 2011)

Semi-supervised pattern classification of medical images: Application to mild cognitive impairment (MCI). - Roman Filipovych; Christos Davatzikos (NeuroImage, 2011)

Semi-supervised cluster analysis of imaging data. - Roman Filipovych; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2011)

Functional principal component model for high-dimensional brain imaging. - Vadim Zipunnikov; Brian C. Caffo; David M. Yousem; Christos Davatzikos; Brian S. Schwartz; Ciprian M. Crainiceanu (NeuroImage, 2011)

Deformable Registration of Glioma Images Using EM Algorithm and Diffusion Reaction Modeling. - Ali Gooya; George Biros; Christos Davatzikos (IEEE Trans. Medical Imaging, 2011)

ODVBA: Optimally-Discriminative Voxel-Based Analysis. - Tianhao Zhang; Christos Davatzikos (IEEE Trans. Medical Imaging, 2011)

Combining Outlier Detection with Random Walker for Automatic Brain Tumor Segmentation. - Vasileios G. Kanas; Evangelia I. Zacharaki; Evangelos Dermatas; Anastasios Bezerianos; Kyriakos N. Sgarbas; Christos Davatzikos (AIAI (2), 2012)

Fuzzy Multi-channel Clustering with Individualized Spatial Priors for Segmenting Brain Lesions and Infarcts. - Evangelia I. Zacharaki; Güray Erus; Anastasios Bezerianos; Christos Davatzikos (AIAI (2), 2012)

Manifold-constrained embeddings for the detection of white matter lesions in brain MRI. - Samuel Kadoury; Güray Erus; Evangelia I. Zacharaki; Nikos Paragios; Christos Davatzikos (ISBI, 2012)

Nonrigid volume registration using second-order MRF model. - Dongjin Kwon; Il Dong Yun; Kilian M. Pohl; Christos Davatzikos; Sang Uk Lee (ISBI, 2012)

Connectivity-based analysis: Application to white matter maturation in mouse brain. - Youssef Rouchdy; Christos Davatzikos; Ragini Verma (ISBI, 2012)

Feature ranking based nested support vector machine ensemble for medical image classification. - Erdem Varol; Bilwaj Gaonkar; Güray Erus; Robert Schultz; Christos Davatzikos (ISBI, 2012)

Deriving Statistical Significance Maps for SVM Based Image Classification and Group Comparisons. - Bilwaj Gaonkar; Christos Davatzikos (MICCAI (1), 2012)

Nonlinear Discriminant Graph Embeddings for Detecting White Matter Lesions in FLAIR MRI. - Samuel Kadoury; Güray Erus; Christos Davatzikos (MLMI, 2012)

Regional Manifold Learning for Deformable Registration of Brain MR Images. - Dong Hye Ye; Jihun Hamm; Dongjin Kwon; Christos Davatzikos; Kilian M. Pohl (MICCAI (3), 2012)

Registration of unseen images based on the generative manifold modeling of variations of appearance and anatomical shape in brain population. - Weiwei Zhang; Christos Davatzikos (MMBIA, 2012)

Sparse Dictionary Learning of Resting State fMRI Networks. - Harini Eavani; Roman Filipovych; Christos Davatzikos; Theodore D. Satterthwaite; Raquel E. Gur; Ruben C. Gur (PRNI, 2012)

A Composite Multivariate Polygenic and Neuroimaging Score for Prediction of Conversion to Alzheimer's Disease. - Roman Filipovych; Bilwaj Gaonkar; Christos Davatzikos (PRNI, 2012)

Multivariate fMRI Analysis Using Optimally-discriminative Voxel-based Analysis. - Tianhao Zhang; Theodore D. Satterthwaite; Mark A. Elliott; Ruben C. Gur; Raquel E. Gur; Christos Davatzikos (PRNI, 2012)

Validation of DRAMMS among 12 Popular Methods in Cross-Subject Cardiac MRI Registration. - Yangming Ou; Dong Hye Ye; Kilian M. Pohl; Christos Davatzikos (WBIR, 2012)

Dynamic Bayesian network modeling for longitudinal brain morphometry. - Rong Chen 005; Susan M. Resnick; Christos Davatzikos; Edward Herskovits (NeuroImage, 2012)

Plasma clusterin concentration is associated with longitudinal brain atrophy in mild cognitive impairment. - Madhav Thambisetty; Yang An; Anna Kinsey; Deepthi Koka; Muzamil Saleem; Andreas Gupsilonntert; Michael A. Kraut; Luigi Ferrucci; Christos Davatzikos; Simon Lovestone; Susan M. Resnick (NeuroImage, 2012)

Generative-Discriminative Basis Learning for Medical Imaging. - Nematollah Batmanghelich; Ben Taskar; Christos Davatzikos (IEEE Trans. Medical Imaging, 2012)

JointMMCC: Joint Maximum-Margin Classification and Clustering of Imaging Data. - Roman Filipovych; Susan M. Resnick; Christos Davatzikos (IEEE Trans. Medical Imaging, 2012)

GLISTR: Glioma Image Segmentation and Registration. - Ali Gooya; Kilian M. Pohl; Michel Bilello; Luigi Cirillo; George Biros; Elias R. Melhem; Christos Davatzikos (IEEE Trans. Medical Imaging, 2012)

Extracting Evolving Pathologies via Spectral Clustering. - Elena Bernardis; Kilian M. Pohl; Christos Davatzikos (IPMI, 2013)

Unsupervised Learning of Functional Network Dynamics in Resting State fMRI. - Harini Eavani; Theodore D. Satterthwaite; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (IPMI, 2013)

Identifying patterns in temporal variation of functional connectivity using resting state FMRI. - Harini Eavani; Theodore D. Satterthwaite; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (ISBI, 2013)

Classifying medical images using morphological appearance manifolds. - Erdem Varol; Bilwaj Gaonkar; Christos Davatzikos (ISBI, 2013)

Segmentation of the Left Ventricle Using Distance Regularized Two-Layer Level Set Approach. - Chaolu Feng; Chunming Li; Dazhe Zhao; Christos Davatzikos; Harold Litt (MICCAI (1), 2013)

A Bayesian Approach for Construction of Sparse Statistical Shape Models Using Dirichlet Distribution. - Ali Gooya; Elaheh Mousavi; Christos Davatzikos; Hongen Liao (AE-CAI, 2013)

Deriving Statistical Significance Maps for Support Vector Regression Using Medical Imaging Data. - Bilwaj Gaonkar; Aristeidis Sotiras; Christos Davatzikos (PRNI, 2013)

A Graph-Based Brain Parcellation Method Extracting Sparse Networks. - Nicolas Honnorat; Harini Eavani; Theodore D. Satterthwaite; Christos Davatzikos (PRNI, 2013)

ODVBA-C: Optimally-Discriminative Voxel-Based Analysis of Continuous Variables. - Tianhao Zhang; Theodore D. Satterthwaite; Christos Davatzikos (PRNI, 2013)

Analytic estimation of statistical significance maps for support vector machine based multi-variate image analysis and classification. - Bilwaj Gaonkar; Christos Davatzikos (NeuroImage, 2013)

Heterogeneous impact of motion on fundamental patterns of developmental changes in functional connectivity during youth. - Theodore D. Satterthwaite; Daniel H. Wolf; Kosha Ruparel; Güray Erus; Mark A. Elliott; Simon B. Eickhoff; Efstathios D. Gennatas; Chad Jackson; Karthik Prabhakaran; Alex R. Smith; Hakon Hakonarson; Ragini Verma; et al. (NeuroImage, 2013)

Optimally-Discriminative Voxel-Based Morphometry significantly increases the ability to detect group differences in schizophrenia, mild cognitive impairment, and Alzheimer's disease. - Tianhao Zhang; Christos Davatzikos (NeuroImage, 2013)

Deformable Medical Image Registration: A Survey. - Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios (IEEE Trans. Medical Imaging, 2013)

Discriminative Sparse Connectivity Patterns for Classification of fMRI Data. - Harini Eavani; Theodore D. Satterthwaite; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (MICCAI (3), 2014)

Combining Generative Models for Multifocal Glioma Segmentation and Registration. - Dongjin Kwon; Russell T. Shinohara; Hamed Akbari; Christos Davatzikos (MICCAI (1), 2014)

Supervised Block Sparse Dictionary Learning for Simultaneous Clustering and Classification in Computational Anatomy. - Erdem Varol; Christos Davatzikos (MICCAI (2), 2014)

Brain abnormality segmentation based on l1-norm minimization. - Ke Zeng; Güray Erus; Manoj Tanwar; Christos Davatzikos (Image Processing, 2014)

Individualized statistical learning from medical image databases: Application to identification of brain lesions. - Güray Erus; Evangelia I. Zacharaki; Christos Davatzikos (Medical Image Anal., 2014)

Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge. - Geert Litjens 001; Robert Toth; Wendy J. M. van de Ven; Caroline Hoeks; Sjoerd Kerkstra; Bram van Ginneken; Graham Vincent; Gwenaël Guillard; Neil Birbeck; Jindang Zhang; Robin Strand; Filip Malmberg; et al. (Medical Image Anal., 2014)

Association of hearing impairment with brain volume changes in older adults. - F. R. Lin; Luigi Ferrucci; Yang An; Joshua Oon Soo Goh; Jimit Doshi; E. J. Metter; Christos Davatzikos; Michael A. Kraut; Susan M. Resnick (NeuroImage, 2014)

Neuroimaging of the Philadelphia Neurodevelopmental Cohort. - Theodore D. Satterthwaite; Mark A. Elliott; Kosha Ruparel; James Loughead; Karthik Prabhakaran; Monica E. Calkins; Ryan Hopson; Chad Jackson; Jack Keefe; Marisa Riley; Frank D. Mentch; Patrick Sleiman; et al. (NeuroImage, 2014)

PORTR: Pre-Operative and Post-Recurrence Brain Tumor Registration. - Dongjin Kwon; Marc Niethammer; Hamed Akbari; Michel Bilello; Christos Davatzikos; Kilian M. Pohl (IEEE Trans. Medical Imaging, 2014)

Comparative Evaluation of Registration Algorithms in Different Brain Databases With Varying Difficulty: Results and Insights. - Yangming Ou; Hamed Akbari; Michel Bilello; Xiao Da; Christos Davatzikos (IEEE Trans. Medical Imaging, 2014)

A Robust Energy Minimization Algorithm for MS-Lesion Segmentation. - Zhaoxuan Gong; Dazhe Zhao; Chunming Li; Wenjun Tan; Christos Davatzikos (ISVC (1), 2015)

Quantification of tumor changes during neoadjuvant chemotherapy with longitudinal breast DCE-MRI registration. - Jia Wu 008; Yangming Ou; Susan P. Weinstein; Emily F. Conant; Ning Yu; Vahid Hoshmand; Brad M. Keller; Ahmed Bilal Ashraf; Mark Rosen; Angela DeMichele; Christos Davatzikos; Despina Kontos (Computer-Aided Diagnosis, 2015)

A superpixel-based framework for automatic tumor segmentation on breast DCE-MRI. - Ning Yu; Jia Wu 008; Susan P. Weinstein; Bilwaj Gaonkar; Brad M. Keller; Ahmed Bilal Ashraf; YunQing Jiang; Christos Davatzikos; Emily F. Conant; Despina Kontos (Computer-Aided Diagnosis, 2015)

GLISTRboost: Combining Multimodal MRI Segmentation, Registration, and Biophysical Tumor Growth Modeling with Gradient Boosting Machines for Glioma Segmentation. - Spyridon Bakas; Ke Zeng; Aristeidis Sotiras; Saima Rathore; Hamed Akbari; Bilwaj Gaonkar; Martin Rozycki; Sarthak Pati; Christos Davatzikos (Brainles@MICCAI, 2015)

Estimating Patient Specific Templates for Pre-operative and Follow-Up Brain Tumor Registration. - Dongjin Kwon; Ke Zeng; Michel Bilello; Christos Davatzikos (MICCAI (2), 2015)

Disentangling Disease Heterogeneity with Max-Margin Multiple Hyperplane Classifier. - Erdem Varol; Aristeidis Sotiras; Christos Davatzikos (MICCAI (1), 2015)

Classification of MRI under the Presence of Disease Heterogeneity using Multi-Task Learning: Application to Bipolar Disorder. - Xiangyang Wang 003; Tianhao Zhang; Tiffany M. Chaim; Marcus V. Zanetti; Christos Davatzikos (MICCAI (1), 2015)

A low cost approach for brain tumor segmentation based on intensity modeling and 3D Random Walker. - Vasileios G. Kanas; Evangelia I. Zacharaki; Christos Davatzikos; Kyriakos N. Sgarbas; Vasileios Megalooikonomou (Biomed. Signal Process. Control., 2015)

Interpreting support vector machine models for multivariate group wise analysis in neuroimaging. - Bilwaj Gaonkar; Russell T. Shinohara; Christos Davatzikos (Medical Image Anal., 2015)

Right ventricle segmentation from cardiac MRI: A collation study. - Caroline Petitjean; Maria A. Zuluaga; Wenjia Bai; Jean-Nicolas Dacher; Damien Grosgeorge; Jérôme Caudron; Su Ruan; Ismail Ben Ayed; Manuel Jorge Cardoso; Hsiang-Chou Chen; Daniel Jimenez-Carretero; María J. Ledesma-Carbayo; et al. (Medical Image Anal., 2015)

Identifying Sparse Connectivity Patterns in the brain using resting-state fMRI. - Harini Eavani; Theodore D. Satterthwaite; Roman Filipovych; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (NeuroImage, 2015)

Vascular risk factors, cerebrovascular reactivity, and the default-mode brain network. - Thaddeus J. Haight; R. Nick Bryan; Güray Erus; Christos Davatzikos; David R. Jacobs Jr.; Mark D'Esposito; Cora E. Lewis; Lenore J. Launer (NeuroImage, 2015)

GraSP: Geodesic Graph-based Segmentation with Shape Priors for the functional parcellation of the cortex. - Nicolas Honnorat; Harini Eavani; Theodore D. Satterthwaite; Raquel E. Gur; Ruben C. Gur; Christos Davatzikos (NeuroImage, 2015)

Finding imaging patterns of structural covariance via Non-Negative Matrix Factorization. - Aristeidis Sotiras; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2015)

A Bayesian Approach to Sparse Model Selection in Statistical Shape Models. - Ali Gooya; Christos Davatzikos; Alejandro F. Frangi (SIAM J. Imaging Sci., 2015)

Structured Outlier Detection in Neuroimaging Studies with Minimal Convex Polytopes. - Erdem Varol; Aristeidis Sotiras; Christos Davatzikos (MICCAI (1), 2016)

Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework. - Ke Zeng; Spyridon Bakas; Aristeidis Sotiras; Hamed Akbari; Martin Rozycki; Saima Rathore; Sarthak Pati; Christos Davatzikos (BrainLes@MICCAI, 2016)

Computational neuroanatomy using brain deformations: From brain parcellation to multivariate pattern analysis and machine learning. - Christos Davatzikos (Medical Image Anal., 2016)

MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection. - Jimit Doshi; Güray Erus; Yangming Ou; Susan M. Resnick; Ruben C. Gur; Raquel E. Gur; Theodore D. Satterthwaite; Susan Furth; Christos Davatzikos (NeuroImage, 2016)

Capturing heterogeneous group differences using mixture-of-experts: Application to a study of aging. - Harini Eavani; Meng-Kang Hsieh; Yang An; Güray Erus; Lori L. Beason-Held; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2016)

Control-group feature normalization for multivariate pattern analysis of structural MRI data using the support vector machine. - Kristin A. Linn; Bilwaj Gaonkar; Theodore D. Satterthwaite; Jimit Doshi; Christos Davatzikos; Russell T. Shinohara (NeuroImage, 2016)

CHIMERA: Clustering of Heterogeneous Disease Effects via Distribution Matching of Imaging Patterns. - Aoyan Dong; Nicolas Honnorat; Bilwaj Gaonkar; Christos Davatzikos (IEEE Trans. Medical Imaging, 2016)

Abnormality Detection via Iterative Deformable Registration and Basis-Pursuit Decomposition. - Ke Zeng; Güray Erus; Aristeidis Sotiras; Russell T. Shinohara; Christos Davatzikos (IEEE Trans. Medical Imaging, 2016)

Pattern recognition of functional brain networks. - Yong Fan 001; Christos Davatzikos (ICASSP, 2017)

Riccati-Regularized Precision Matrices for Neuroimaging. - Nicolas Honnorat; Christos Davatzikos (IPMI, 2017)

Improved brain tumor segmentation by utilizing tumor growth model in longitudinal brain MRI. - Linmin Pei; Syed M. S. Reza; Wei Li; Christos Davatzikos; Khan M. Iftekharuddin (Computer-Aided Diagnosis, 2017)

Subject-Specific Structural Parcellations Based on Randomized AB-divergences. - Nicolas Honnorat; Drew Parker; Birkan Tunç; Christos Davatzikos; Ragini Verma (MICCAI (1), 2017)

Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma. - Saima Rathore; Spyridon Bakas; Sarthak Pati; Hamed Akbari; Ratheesh Kalarot; Patmaa Sridharan; Martin Rozycki; Mark Bergman; Birkan Tunç; Ragini Verma; Michel Bilello; Christos Davatzikos (BrainLes@MICCAI, 2017)

A framework for scalable biophysics-based image analysis. - Amir Gholami; Andreas Mang; Klaudius Scheufele; Christos Davatzikos; Miriam Mehl; George Biros (SC, 2017)

Sparse Hierachical Extrapolated Parametric Methods for Cortical Data Analysis. - Nicolas Honnorat; Christos Davatzikos (CoRR, 2017)

Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity. - Rastko Ciric; Daniel H. Wolf; Jonathan D. Power; David R. Roalf; Graham L. Baum; Kosha Ruparel; Russell T. Shinohara; Mark A. Elliott; Simon B. Eickhoff; Christos Davatzikos; Ruben C. Gur; Raquel E. Gur; et al. (NeuroImage, 2017)

A review on neuroimaging-based classification studies and associated feature extraction methods for Alzheimer's disease and its prodromal stages. - Saima Rathore; Mohamad Habes; Muhammad Aksam Iftikhar; Amanda Shacklett; Christos Davatzikos (NeuroImage, 2017)

HYDRA: Revealing heterogeneity of imaging and genetic patterns through a multiple max-margin discriminative analysis framework. - Erdem Varol; Aristeidis Sotiras; Christos Davatzikos (NeuroImage, 2017)

GPU accelerated extraction of sparse Granger causality patterns. - Dushyant Sahoo; Nicolas Honnorat; Christos Davatzikos (ISBI, 2018)

Regionally discriminative multivariate statistical mapping. - Erdem Varol; Aristeidis Sotiras; Christos Davatzikos (ISBI, 2018)

Statistically-constrained robust diffeomorphic registration. - Ke Zeng; Aristeidis Sotiras; Christos Davatzikos (ISBI, 2018)

Deformable image registration as a tool to improve survival prediction after neoadjuvant chemotherapy for breast cancer: results from the ACRIN 6657/I-SPY-1 trial. - Nariman Jahani; Eric A. Cohen; Meng-Kang Hsieh; Susan P. Weinstein; Lauren Pantalone; Christos Davatzikos; Despina Kontos (Computer-Aided Diagnosis, 2018)

Deriving stable multi-parametric MRI radiomic signatures in the presence of inter-scanner variations: survival prediction of glioblastoma via imaging pattern analysis and machine learning techniques. - Saima Rathore; Spyridon Bakas; Hamed Akbari; Gaurav Shukla; Martin Rozycki; Christos Davatzikos (Computer-Aided Diagnosis, 2018)

Multi-stage Association Analysis of Glioblastoma Gene Expressions with Texture and Spatial Patterns. - Samar S. M. Elsheikh; Spyridon Bakas; Nicola J. Mulder; Emile R. Chimusa; Christos Davatzikos; Alessandro Crimi (BrainLes@MICCAI (1), 2018)

Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans. - Xu Han 009; Spyridon Bakas; Roland Kwitt; Stephen R. Aylward; Hamed Akbari; Michel Bilello; Christos Davatzikos; Marc Niethammer (BrainLes@MICCAI (1), 2018)

Generative Discriminative Models for Multivariate Inference and Statistical Mapping in Medical Imaging. - Erdem Varol; Aristeidis Sotiras; Ke Zeng; Christos Davatzikos (MICCAI (3), 2018)

Technical note: a radiomic signature of infiltration in peritumoral edema predicts subsequent recurrence in glioblastoma. - Saima Rathore; Hamed Akbari; Jimit Doshi; Gaurav Shukla; Martin Rozycki; Michel Bilello; Robert Lustig; Christos Davatzikos (Image-Guided Procedures, 2018)

Extrapolated nonnegative decompositions for the analysis of functional connectivity. - Nicolas Honnorat; Christos Davatzikos (Image Processing, 2018)

High resolution robust and smooth precision matrices to capture functional connectivity. - Nicolas Honnorat; Christos Davatzikos (Image Processing, 2018)

PDE-constrained optimization in medical image analysis. - Andreas Mang; Amir Gholami; Christos Davatzikos; George Biros (CoRR, 2018)

Longitudinally and inter-site consistent multi-atlas based parcellation of brain anatomy using harmonized atlases. - Güray Erus; Jimit Doshi; Yang An; Dimitris Verganelakis; Susan M. Resnick; Christos Davatzikos (NeuroImage, 2018)

Quantitative assessment of structural image quality. - Adon F. G. Rosen; David R. Roalf; Kosha Ruparel; Jason Blake; Kevin Seelaus; Lakshmi P. Villa; Rastko Ciric; Philip A. Cook; Christos Davatzikos; Mark A. Elliott; Angel Garcia de La Garza; Efstathios D. Gennatas; et al. (NeuroImage, 2018)

Evaluation of non-negative matrix factorization of grey matter in age prediction. - Deepthi P. Varikuti; Sarah Genon; Aristeidis Sotiras; Holger Schwender; Felix Hoffstaedter; Kaustubh R. Patil; Christiane Jockwitz; Svenja Caspers; Susanne Moebus; Katrin Amunts; Christos Davatzikos; Simon B. Eickhoff (NeuroImage, 2018)

MIDAS: Regionally linear multivariate discriminative statistical mapping. - Erdem Varol; Aristeidis Sotiras; Christos Davatzikos (NeuroImage, 2018)

The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview. - Sarthak Pati; Ashish Singh; Saima Rathore; Aimilia Gastounioti; Mark Bergman; Phuc Ngo; Sung Min Ha; Dimitrios Bounias; James Minock; Grayson Murphy; Hongming Li; Amit Bhattarai; et al. (BrainLes@MICCAI (2), 2019)

Skull-Stripping of Glioblastoma MRI Scans Using 3D Deep Learning. - Siddhesh P. Thakur; Jimit Doshi; Sarthak Pati; Sung Min Ha; Chiharu Sako; Sanjay N. Talbar; Uday Kulkarni; Christos Davatzikos; Güray Erus; Spyridon Bakas (BrainLes@MICCAI (1), 2019)

Non-invasive transcriptomic classification of de novo Glioblastoma patients through multivariate quantitative analysis of baseline preoperative multimodal magnetic resonance imaging. - Saima Rathore; Hamed Akbari; Spyridon Bakas; Jared Pisapia; Xiao Da; Donald M. O'Rourke; Christos Davatzikos (Computer-Aided Diagnosis, 2019)

Regularized topological data analysis for extraction of coherent brain regions. - Ishaan Batta; Nicolas Honnorat; Christos Davatzikos (Image Processing, 2019)

Sparse low-dimensional causal modeling for the analysis of brain function. - Dushyant Sahoo; Nicolas Honnorat; Christos Davatzikos (Image Processing, 2019)

IJCARS-MICCAI 2018 special issue. - Gabor Fichtinger; Julia A. Schnabel; Christos Davatzikos; Alejandro F. Frangi; Carlos Alberola-López (Int. J. Comput. Assist. Radiol. Surg., 2019)

Extraction of hierarchical functional connectivity components in human brain using resting-state fMRI. - Dushyant Sahoo; Danielle S. Bassett; Christos Davatzikos (CoRR, 2019)

DeepMRSeg: A convolutional deep neural network for anatomy and abnormality segmentation on MR images. - Jimit Doshi; Güray Erus; Mohamad Habes; Christos Davatzikos (CoRR, 2019)

Open Source Software Sustainability Models: Initial White Paper from the Information Technology for Cancer Research Sustainability and Industry Partnership Work Group. - Y. Ye; Richard D. Boyce; M. K. Davis; Keith O. Elliston; Christos Davatzikos; Andrey Fedorov; Jean-Christophe Fillion-Robin; Ian T. Foster; John R. Gilbertson; Mervi Heiskanen; Juli D. Klemm; Andras Lasso; et al. (CoRR, 2019)

Multivariate Analysis of Preoperative Magnetic Resonance Imaging Reveals Transcriptomic Classification of de novo Glioblastoma Patients. - Saima Rathore; Hamed Akbari; Spyridon Bakas; Jared Pisapia; Gaurav Shukla; Jeffrey D. Rudie; Xiao Da; Ramana V. Davuluri; Nadia Dahmane; Donald M. O'Rourke; Christos Davatzikos (Frontiers Comput. Neurosci., 2019)

Special issue on MICCAI 2018. - Julia A. Schnabel; Christos Davatzikos; Gabor Fichtinger; Alejandro F. Frangi; Carlos Alberola-López (Medical Image Anal., 2019)

Machine learning in neuroimaging: Progress and challenges. - Christos Davatzikos (NeuroImage, 2019)

CLAIRE: A Distributed-Memory Solver for Constrained Large Deformation Diffeomorphic Image Registration. - Andreas Mang; Amir Gholami; Christos Davatzikos; George Biros (SIAM J. Sci. Comput., 2019)

Computational Diagnostics of GBM Tumors in the Era of Radiomics and Radiogenomics. - Anahita Fathi Kazerooni; Christos Davatzikos (BrainLes@MICCAI (1), 2020)

Estimating Glioblastoma Biophysical Growth Parameters Using Deep Learning Regression. - Sarthak Pati; Vaibhav Sharma; Heena Aslam; Siddhesh P. Thakur; Hamed Akbari; Andreas Mang; Shashank Subramanian; George Biros; Christos Davatzikos; Spyridon Bakas (BrainLes@MICCAI (1), 2020)

A Deep Network for Joint Registration and Reconstruction of Images with Pathologies. - Xu Han 009; Zhengyang Shen; Zhenlin Xu; Spyridon Bakas; Hamed Akbari; Michel Bilello; Christos Davatzikos; Marc Niethammer (MLMI@MICCAI, 2020)

O-Net: An Overall Convolutional Network for Segmentation Tasks. - Omid Haji Maghsoudi; Aimilia Gastounioti; Lauren Pantalone; Christos Davatzikos; Spyridon Bakas; Despina Kontos (MLMI@MICCAI, 2020)

MAGIC: Multi-scale Heterogeneity Analysis and Clustering for Brain Diseases. - Junhao Wen 002; Erdem Varol; Ganesh B. Chand; Aristeidis Sotiras; Christos Davatzikos (MICCAI (7), 2020)

Integrative radiomic analysis for pre-surgical prognostic stratification of glioblastoma patients: from advanced to basic MRI protocols. - Spyridon Bakas; Gaurav Shukla; Hamed Akbari; Güray Erus; Aristeidis Sotiras; Saima Rathore; Chiharu Sako; Sung Min Ha; Martin Rozycki; Ashish Singh; Russell T. Shinohara; Michel Bilello; et al. (Image-Guided Procedures, 2020)

Longitudinal brain tumor segmentation prediction in MRI using feature and label fusion. - Linmin Pei; Spyridon Bakas; Arastoo Vossough; Syed M. S. Reza; Christos Davatzikos; Khan M. Iftekharuddin (Biomed. Signal Process. Control., 2020)

Smile-GANs: Semi-supervised clustering via GANs for dissecting brain disease heterogeneity from medical images. - Zhijian Yang; Junhao Wen 002; Christos Davatzikos (CoRR, 2020)

A review of deep learning in medical imaging: Image traits, technology trends, case studies with progress highlights, and future promises. - S. Kevin Zhou; Hayit Greenspan; Christos Davatzikos; James S. Duncan; Bram van Ginneken; Anant Madabhushi; Jerry L. Prince; Daniel Rueckert; Ronald M. Summers (CoRR, 2020)

Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging. - Vishnu M. Bashyam; Jimit Doshi; Güray Erus; Dhivya Srinivasan; Ahmed Abdulkadir; Mohamad Habes; Yong Fan 001; Colin L. Masters; Paul Maruff; Chuanjun Zhuo; Henry Völzke; Sterling C. Johnson; et al. (CoRR, 2020)

Associations between cognitive and brain volume changes in cognitively normal older adults. - Nicole M. Armstrong; Yang An; John J. Shin; Owen A. Williams; Jimit Doshi; Güray Erus; Christos Davatzikos; Luigi Ferrucci; Lori L. Beason-Held; Susan M. Resnick (NeuroImage, 2020)

Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data. - Joanne C. Beer; Nicholas J. Tustison; Philip A. Cook; Christos Davatzikos; Yvette I. Sheline; Russell T. Shinohara; Kristin A. Linn (NeuroImage, 2020)

Lasting consequences of concussion on the aging brain: Findings from the Baltimore Longitudinal Study of Aging. - Danielle June; Owen A. Williams; Chiung-Wei Huang; Yang An; Bennett A. Landman; Christos Davatzikos; Murat Bilgel; Susan M. Resnick; Lori L. Beason-Held (NeuroImage, 2020)

Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan. - Raymond Pomponio; Güray Erus; Mohamad Habes; Jimit Doshi; Dhivya Srinivasan; Elizabeth Mamourian; Vishnu Bashyam; Ilya M. Nasrallah; Theodore D. Satterthwaite; Yong Fan 001; Lenore J. Launer; Colin L. Masters; et al. (NeuroImage, 2020)

A comparison of Freesurfer and multi-atlas MUSE for brain anatomy segmentation: Findings about size and age bias, and inter-scanner stability in multi-site aging studies. - Dhivya Srinivasan; Güray Erus; Jimit Doshi; David A. Wolk; Haochang Shou; Mohamad Habes; Christos Davatzikos (NeuroImage, 2020)

Harmonization with Flow-Based Causal Inference. - Rongguang Wang; Pratik Chaudhari; Christos Davatzikos (MICCAI (3), 2021)

Learning Robust Hierarchical Patterns of Human Brain across Many fMRI Studies. - Dushyant Sahoo; Christos Davatzikos (NeurIPS, 2021)

Disentangling brain heterogeneity via semi-supervised deep-learning and MRI: dimensional representations of Alzheimer's Disease. - Zhijian Yang; Ilya M. Nasrallah; Haochang Shou; Junhao Wen 002; Jimit Doshi; Mohamad Habes; Güray Erus; Ahmed Abdulkadir; Susan M. Resnick; David A. Wolk; Christos Davatzikos (CoRR, 2021)

GaNDLF: A Generally Nuanced Deep Learning Framework for Scalable End-to-End Clinical Workflows in Medical Imaging. - Sarthak Pati; Siddhesh P. Thakur; Megh Bhalerao; Ujjwal Baid; Caleb M. Grenko; Brandon Edwards; Micah J. Sheller; Jose Agraz; Bhakti Baheti; Vishnu Bashyam; Parth Sharma; Babak Haghighi; et al. (CoRR, 2021)

Embracing the Disharmony in Heterogeneous Medical Data. - Rongguang Wang; Pratik Chaudhari; Christos Davatzikos (CoRR, 2021)

Extraction of Hierarchical Functional Connectivity Components in human brain using Adversarial Learning. - Dushyant Sahoo; Christos Davatzikos (CoRR, 2021)

The Federated Tumor Segmentation (FeTS) Challenge. - Sarthak Pati; Ujjwal Baid; Maximilian Zenk; Brandon Edwards; Micah J. Sheller; G. Anthony Reina; Patrick Foley; Alexey Gruzdev; Jason Martin; Shadi Albarqouni; Yong Chen 016; Russell Taki Shinohara; et al. (CoRR, 2021)

Ensemble inversion for brain tumor growth models with mass effect. - Shashank Subramanian; Klaudius Scheufele; Naveen Himthani; Christos Davatzikos; George Biros (CoRR, 2021)

The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification. - Ujjwal Baid; Satyam Ghodasara; Michel Bilello; Suyash Mohan; Evan Calabrese; Errol Colak; Keyvan Farahani; Jayashree Kalpathy-Cramer; Felipe C. Kitamura; Sarthak Pati; Luciano M. Prevedello; Jeffrey D. Rudie; et al. (CoRR, 2021)

Disentangling Alzheimer's disease neurodegeneration from typical brain aging using machine learning. - Gyujoon Hwang; Ahmed Abdulkadir; Güray Erus; Mohamad Habes; Raymond Pomponio; Haochang Shou; Jimit Doshi; Elizabeth Mamourian; Tanweer Rashid; Murat Bilgel; Yong Fan 001; Aristeidis Sotiras; et al. (CoRR, 2021)

Multidimensional representations in late-life depression: convergence in neuroimaging, cognition, clinical symptomatology and genetics. - Junhao Wen 002; Cynthia H. Y. Fu; Duygu Tosun; Yogasudha Veturi; Zhijian Yang; Ahmed Abdulkadir; Elizabeth Mamourian; Dhivya Srinivasan; Jingxuan Bao; Güray Erus; Haochang Shou; Mohamad Habes; et al. (CoRR, 2021)

The Brain Tumor Sequence Registration Challenge: Establishing Correspondence between Pre-Operative and Follow-up MRI scans of diffuse glioma patients. - Bhakti Baheti; Diana Waldmannstetter; Satrajit Chakrabarty; Hamed Akbari; Michel Bilello; Benedikt Wiestler; Julian Schwarting; Evan Calabrese; Jeffrey D. Rudie; Syed Amaan Abidi; Mina Mousa; Javier E. Villanueva-Meyer; et al. (CoRR, 2021)

QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Metrics and Benchmarking Results. - Raghav Mehta; Angelos Filos; Ujjwal Baid; Chiharu Sako; Richard McKinley; Michael Rebsamen; Katrin Dätwyler; Raphael Meier; Piotr Radojewski; Gowtham Krishnan Murugesan; Sahil S. Nalawade; Chandan Ganesh; et al. (CoRR, 2021)

A Review of Deep Learning in Medical Imaging: Imaging Traits, Technology Trends, Case Studies With Progress Highlights, and Future Promises. - S. Kevin Zhou; Hayit Greenspan; Christos Davatzikos; James S. Duncan; Bram van Ginneken; Anant Madabhushi; Jerry L. Prince; Daniel Rueckert; Ronald M. Summers (Proc. IEEE, 2021)

Hierarchical Extraction of Functional Connectivity Components in Human Brain Using Resting-State fMRI. - Dushyant Sahoo; Theodore D. Satterthwaite; Christos Davatzikos (IEEE Trans. Medical Imaging, 2021)

Preference Matrix Guided Sparse Canonical Correlation Analysis for Genetic Study of Quantitative Traits in Alzheimer's Disease. - Jiahang Sha; Jingxuan Bao; Kefei Liu 001; Shu Yang 009; Zixuan Wen; Yuhan Cui; Junhao Wen 002; Christos Davatzikos; Jason H. Moore; Andrew J. Saykin; Qi Long; Li Shen 001 (BIBM, 2022)

Surreal-GAN: Semi-Supervised Representation Learning via GAN for uncovering heterogeneous disease-related imaging patterns. - Zhijian Yang; Junhao Wen 002; Christos Davatzikos (ICLR, 2022)

Harmonization of multi-site functional connectivity measures in tangent space improves brain age prediction. - Zhen Zhou 004; Dhivya Srinivasan; Hongming Li; Ahmed Abdulkadir; Haochang Shou; Christos Davatzikos; Yong Fan 001 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2022)

Automated segmentation of pediatric brain tumors based on multi-parametric MRI and deep learning. - Rachel Madhogarhia; Anahita Fathi Kazerooni; Sherjeel Arif; Jeffrey B. Ware; Ariana M. Familiar; Lorenna Vidal; Sina Bagheri; Hannah Anderson; Debanjan Haldar; Sophie Yagoda; Erin Graves; Michael Spadola; et al. (Computer-Aided Diagnosis, 2022)

Deep Kernel Learning with Temporal Gaussian Processes for Clinical Variable Prediction in Alzheimer's Disease. - Vasiliki Tassopoulou; Fanyang Yu; Christos Davatzikos (ML4H@NeurIPS, 2022)

Subtyping brain diseases from imaging data. - Junhao Wen 002; Erdem Varol; Zhijian Yang; Gyujoon Hwang; Dominique Dwyer; Anahita Fathi Kazerooni; Paris Alexandros Lalousis; Christos Davatzikos (CoRR, 2022)

Robust Hierarchical Patterns for identifying MDD patients: A Multisite Study. - Dushyant Sahoo; Mathilde Antoniades; Cynthia H. Y. Fu; Christos Davatzikos (CoRR, 2022)

Federated Learning Enables Big Data for Rare Cancer Boundary Detection. - Sarthak Pati; Ujjwal Baid; Brandon Edwards; Micah J. Sheller; Hans Shih-Han Wang; G. Anthony Reina; Patrick Foley; Alexey Gruzdev; Deepthi Karkada; Christos Davatzikos; Chiharu Sako; Satyam Ghodasara; et al. (CoRR, 2022)

Machine Learning Models Are Not Necessarily Biased When Constructed Properly: Evidence from Neuroimaging Studies. - Rongguang Wang; Pratik Chaudhari; Christos Davatzikos (CoRR, 2022)

Deep Learning Based Detection of Enlarged Perivascular Spaces on Brain MRI. - Tanweer Rashid; Hangfan Liu; Jeffrey B. Ware; Karl Li; Jose Rafael Romero; Elyas Fadaee; Ilya M. Nasrallah; Saima Hilal; R. Nick Bryan; Timothy M. Hughes; Christos Davatzikos; Lenore J. Launer; et al. (CoRR, 2022)

Embracing the disharmony in medical imaging: A Simple and effective framework for domain adaptation. - Rongguang Wang; Pratik Chaudhari; Christos Davatzikos (Medical Image Anal., 2022)

Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes. - Junhao Wen 002; Erdem Varol; Aristeidis Sotiras; Zhijian Yang; Ganesh B. Chand; Güray Erus; Haochang Shou; Ahmed Abdulkadir; Gyujoon Hwang; Dominic B. Dwyer; Alessandro Pigoni; Paola Dazzan; et al. (Medical Image Anal., 2022)

Harmonizing functional connectivity reduces scanner effects in community detection. - Andrew A. Chen; Dhivya Srinivasan; Raymond Pomponio; Yong Fan 001; Ilya M. Nasrallah; Susan M. Resnick; Lori L. Beason-Held; Christos Davatzikos; Theodore D. Satterthwaite; Dani S. Bassett; Russell T. Shinohara; Haochang Shou (NeuroImage, 2022)

Identifying Shared Neuroanatomic Architecture Between Cognitive Traits Through Multiscale Morphometric Correlation Analysis. - Zixuan Wen; Jingxuan Bao; Shu Yang 009; Shannon L. Risacher; Andrew J. Saykin; Paul M. Thompson; Christos Davatzikos; Heng Huang; Yize Zhao; Li Shen 001 (MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI, 2023)

Shape analysis of amygdala atrophy using SPHARM-OT. - Zexuan Wang; Jiong Chen; Wenxi Yang; Sumita Garai; Frederick H. Xu; Junhao Wen 002; Christos Davatzikos; Li Shen 001 (Image Processing, 2023)

Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering. - Zhijian Yang; Junhao Wen 002; Ahmed Abdulkadir; Yuhan Cui; Güray Erus; Elizabeth Mamourian; Randa Melhem; Dhivya Srinivasan; Sindhuja T. Govindarajan; Jiong Chen; Mohamad Habes; Colin L. Masters; et al. (CoRR, 2023)

The Brain Tumor Segmentation (BraTS) Challenge 2023: Local Synthesis of Healthy Brain Tissue via Inpainting. - Florian Kofler; Felix Meissen; Felix Steinbauer; Robert Graf; Eva Oswald; Ezequiel de la Rosa; Hongwei Bran Li; Ujjwal Baid; Florian A. Hölzl; Özgün Turgut; Izabela Horvath; Diana Waldmannstetter; et al. (CoRR, 2023)

The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn). - Hongwei Bran Li; Gian Marco Conte; Syed Muhammad Anwar; Florian Kofler; Koen Van Leemput; Marie Piraud; Ivan Ezhov; Felix Meissen; Maruf Adewole; Anastasia Janas; Anahita Fathi Kazerooni; Dominic LaBella; et al. (CoRR, 2023)

Adapting Machine Learning Diagnostic Models to New Populations Using a Small Amount of Data: Results from Clinical Neuroscience. - Rongguang Wang; Güray Erus; Pratik Chaudhari; Christos Davatzikos (CoRR, 2023)

Computing personalized brain functional networks from fMRI using self-supervised deep learning. - Hongming Li; Dhivya Srinivasan; Chuanjun Zhuo; Zaixu Cui; Raquel E. Gur; Ruben C. Gur; Desmond J. Oathes; Christos Davatzikos; Theodore D. Satterthwaite; Yong Fan 001 (Medical Image Anal., 2023)

Applications of generative adversarial networks in neuroimaging and clinical neuroscience. - Rongguang Wang; Vishnu Bashyam; Zhijian Yang; Fanyang Yu; Vasiliki Tassopoulou; Sai Spandana Chintapalli; Ioanna Skampardoni; Lasya P. Sreepada; Dushyant Sahoo; Konstantina S. Nikita; Ahmed Abdulkadir; Junhao Wen 002; et al. (NeuroImage, 2023)

Multiscale functional connectivity patterns of the aging brain learned from harmonized rsfMRI data of the multi-cohort iSTAGING study. - Zhen Zhou 004; Hongming Li; Dhivya Srinivasan; Ahmed Abdulkadir; Ilya M. Nasrallah; Junhao Wen 002; Jimit Doshi; Güray Erus; Elizabeth Mamourian; R. Nick Bryan; David A. Wolk; Lori L. Beason-Held; et al. (NeuroImage, 2023)

Ensemble Inversion for Brain Tumor Growth Models With Mass Effect. - Shashank Subramanian; Ali Ghafouri; Klaudius Matthias Scheufele; Naveen Himthani; Christos Davatzikos; George Biros (IEEE Trans. Medical Imaging, 2023)

Associations of baseline and longitudinal change in cerebellum volume with age-related changes in verbal learning and memory. - C'iana P. Cooper; Andrea T. Shafer; Nicole M. Armstrong; Yang An; Güray Erus; Christos Davatzikos; Luigi Ferrucci; Peter R. Rapp; Susan M. Resnick (NeuroImage, 2023)

Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization. - Fengling Hu; Andrew A. Chen; Hannah Horng; Vishnu Bashyam; Christos Davatzikos; Aaron Alexander-Bloch; Mingyao Li; Haochang Shou; Theodore D. Satterthwaite; Meichen Yu; Russell T. Shinohara (NeuroImage, 2023)

Brain-wide genome-wide colocalization study for integrating genetics, transcriptomics and brain morphometry in Alzheimer's disease. - Jingxuan Bao; Junhao Wen 002; Zixuan Wen; Shu Yang 009; Yuhan Cui; Zhijian Yang; Güray Erus; Andrew J. Saykin; Qi Long; Christos Davatzikos; Li Shen 001 (NeuroImage, 2023)

Mutually-Constrained Cross-Sectional and Longitudinal Non-Negative Matrix Factorization: Application to Modeling Brain Aging Trajectories. - Ioanna Skampardoni; Junhao Wen 002; Güray Erus; Haochang Shou; Konstantina S. Nikita; Christos Davatzikos (ISBI, 2024)

Multiscale Estimation of Morphometricity for Revealing Neuroanatomical Basis of Cognitive Traits. - Zixuan Wen; Jingxuan Bao; Shu Yang 009; Junhao Wen 002; Qipeng Zhan; Yuhan Cui; Güray Erus; Zhijian Yang; Paul M. Thompson; Yize Zhao; Christos Davatzikos; Li Shen 001 (ISBI, 2024)

Dimensional Neuroimaging Endophenotypes: Neurobiological Representations of Disease Heterogeneity Through Machine Learning. - Junhao Wen 002; Mathilde Antoniades; Zhijian Yang; Gyujoon Hwang; Ioanna Skampardoni; Rongguang Wang; Christos Davatzikos (CoRR, 2024)

Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge. - Dominic LaBella; Ujjwal Baid; Omaditya Khanna; Shan McBurney-Lin; Ryan McLean; Pierre Nedelec; Arif Rashid; Nourel Hoda Tahon; Talissa Altes; Radhika Bhalerao; Yaseen Dhemesh; Devon Godfrey; et al. (CoRR, 2024)

BraTS-PEDs: Results of the Multi-Consortium International Pediatric Brain Tumor Segmentation Challenge 2023. - Anahita Fathi Kazerooni; Nastaran Khalili; Xinyang Liu; Debanjan Haldar; Zhifan Jiang; Anna Zapaishchykova; Julija Pavaine; Lubdha M. Shah; Blaise V. Jones; Nakul Sheth; Sanjay P. Prabhu; Aaron S. McAllister; et al. (CoRR, 2024)

Brain age identification from diffusion MRI synergistically predicts neurodegenerative disease. - Chenyu Gao; Michael E. Kim; Karthik Ramadass; Praitayini Kanakaraj; Aravind R. Krishnan; Adam M. Saunders; Nancy R. Newlin; Ho Hin Lee; Qi Yang 004; Warren D. Taylor; Brian D. Boyd; Lori L. Beason-Held; et al. (CoRR, 2024)

A comprehensive interpretable machine learning framework for Mild Cognitive Impairment and Alzheimer's disease diagnosis. - Maria Eleftheria Vlontzou; Maria Athanasiou; Kalliopi Dalakleidi; Ioanna Skampardoni; Christos Davatzikos; Konstantina S. Nikita (CoRR, 2024)

Interpretable deep clustering survival machines for Alzheimer's disease subtype discovery. - Bojian Hou; Zixuan Wen; Jingxuan Bao; Richard Zhang; Boning Tong; Shu Yang 009; Junhao Wen 002; Yuhan Cui; Jason H. Moore; Andrew J. Saykin; Heng Huang; Paul M. Thompson; et al. (Medical Image Anal., 2024)

Adaptive Shrinkage Estimation for Personalized Deep Kernel Regression in Modeling Brain Trajectories. - Vasiliki Tassopoulou; Haochang Shou; Christos Davatzikos (ICLR, 2025)

High-dimensional mediation analysis reveals the mediating role of physical activity patterns in genetic pathways leading to AD-like brain atrophy. - Hanxiang Xu; Shizhuo Mu; Jingxuan Bao; Christos Davatzikos; Haochang Shou; Li Shen 001 (BioData Min., 2025)

Brain Tumor Sequence Registration (BraTS-Reg) Challenge Dataset. - Bhakti Baheti; Satrajit Chakrabarty; Hamed Akbari; Michel Bilello; Benedikt Wiestler; Julian Schwarting; Evan Calabrese; Jeffrey D. Rudie; Syed Amaan Abidi; Mina Mousa; Javier E. Villanueva-Meyer; Brandon K. K. Fields; et al. (Zenodo, 2025)

Pitfalls of defacing whole-head MRI: re-identification risk with diffusion models and compromised research potential. - Chenyu Gao; Kaiwen Xu; Michael E. Kim; Lianrui Zuo; Zhiyuan Li 012; Derek B. Archer; Timothy J. Hohman; Ann Zenobia Moore; Luigi Ferrucci; Lori L. Beason-Held; Susan M. Resnick; Christos Davatzikos; et al. (CoRR, 2025)

Comparative assessment of fairness definitions and bias mitigation strategies in machine learning-based diagnosis of Alzheimer's disease from MR images. - Maria Eleftheria Vlontzou; Maria Athanasiou; Christos Davatzikos; Konstantina S. Nikita (CoRR, 2025)