FPGA based architecture for DNA sequence comparison and database search. - Euripides Sotiriades; Christos Kozanitis; Apostolos Dollas (IPDPS, 2006)

Some initial results on hardware BLAST acceleration with a reconfigurable architecture. - Euripides Sotiriades; Christos Kozanitis; Apostolos Dollas (IPDPS, 2006)

Rapid Phototyping of a System-on-a-Chip for the BLAST Algorithm Implementation. - Euripides Sotiriades; Christos Kozanitis; Grigorios Chrysos 001; Apostolos Dollas (IEEE International Workshop on Rapid System Prototyping, 2006)

Leaping Multiple Headers in a Single Bound: Wire-Speed Parsing Using the Kangaroo System. - Christos Kozanitis; John Huber; Sushil Singh; George Varghese (INFOCOM, 2010)

Compressing Genomic Sequence Fragments Using SlimGene. - Christos Kozanitis; Christopher T. Saunders; Semyon Kruglyak; Vineet Bafna; George Varghese (J. Comput. Biol., 2011)

Abstractions for genomics. - Vineet Bafna; Alin Deutsch; Andrew Heiberg; Christos Kozanitis; Lucila Ohno-Machado; George Varghese (Commun. ACM, 2013)

Compressing and Querrying the Human Genome. - Christos Kozanitis (2013)

Using Genome Query Language to uncover genetic variation. - Christos Kozanitis; Andrew Heiberg; George Varghese; Vineet Bafna (Bioinform., 2014)

GenAp: a distributed SQL interface for genomic data. - Christos Kozanitis; David A. Patterson 001 (BMC Bioinform., 2016)

VineTalk: Simplifying software access and sharing of FPGAs in datacenters. - Stelios Mavridis; Emmanouil Pavlidakis; Ioannis Stamoulias; Christos Kozanitis; Nikolaos Chrysos; Christoforos Kachris; Dimitrios Soudris; Angelos Bilas (FPL, 2017)

The VINEYARD integrated framework for hardware accelerators in the cloud. - Christoforos Kachris; Dimitrios Soudris; Stelios Mavridis; Manolis Pavlidakis; Christi Symeonidou; Christos Kozanitis; Angelos Bilas; Damon Fenacci; Sharatchandra Varma Bogaraju; Hans Vandierendonck; Dimitrios S. Nikolopoulos (SAMOS, 2018)

QuMan: Profile-based Improvement of Cluster Utilization. - Yannis Sfakianakis; Christos Kozanitis; Christos Kozyrakis; Angelos Bilas (ACM Trans. Archit. Code Optim., 2018)

Efficient Convolutional Neural Network Weight Compression for Space Data Classification on Multi-fpga Platforms. - George Pitsis; Grigorios Tsagkatakis; Christos Kozanitis; Ioannis Kalomoiris; Aggelos Ioannou; Apostolos Dollas; Manolis G. H. Katevenis; Panagiotis Tsakalides (ICASSP, 2019)

EVOLVE: HPC and cloud enhanced testbed for extracting value from large-scale diverse data. - Antony Chazapis; Jean-Thomas Acquaviva; Angelos Bilas; Georgios Gardikis; Christos Kozanitis; Stelios Louloudakis; Huy-Nam Nguyen; Christian Pinto; Arno Scharl; Dimitrios Soudris (CF, 2021)

A unified storage layer for supporting distributed workflows in kubernetes. - Antony Chazapis; Christian Pinto; Yiannis Gkoufas; Christos Kozanitis; Angelos Bilas (CHEOPS@EuroSys, 2021)

H3: An Application-Level, Low-Overhead Object Store. - Antony Chazapis; Efstratios Politis; Giorgos Kalaentzis; Christos Kozanitis; Angelos Bilas (ISC Workshops, 2021)

Freeing Compute Caches from Serialization and Garbage Collection in Managed Big Data Analytics. - Iacovos G. Kolokasis; Giannos Evdorou; Anastasios Papagiannis; Foivos S. Zakkak; Christos Kozanitis; Shoaib Akram 001; Polyvios Pratikakis; Angelos Bilas (CoRR, 2021)

LatEst: Vertical elasticity for millisecond serverless execution. - Yannis Sfakianakis; Manolis Marazakis; Christos Kozanitis; Angelos Bilas (CCGRID, 2022)

EVOLVE: Towards Converging Big-Data, High-Performance and Cloud-Computing Worlds. - Achilleas Tzenetopoulos; Dimosthenis Masouros; Konstantina Koliogeorgi; Sotirios Xydis; Dimitrios Soudris; Antony Chazapis; Christos Kozanitis; Angelos Bilas; Christian Pinto; Huy-Nam Nguyen; Stelios Louloudakis; Georgios Gardikis; et al. (DATE, 2022)

Virtual Clusters: Isolated, Containerized HPC Environments in Kubernetes. - George Zervas; Antony Chazapis; Yannis Sfakianakis; Christos Kozanitis; Angelos Bilas (ISC Workshops, 2022)

TeraHeap: Reducing Memory Pressure in Managed Big Data Frameworks. - Iacovos G. Kolokasis; Giannos Evdorou; Shoaib Akram 001; Christos Kozanitis; Anastasios Papagiannis; Foivos S. Zakkak; Polyvios Pratikakis; Angelos Bilas (ASPLOS (3), 2023)

TeraHeap: Exploiting Flash Storage for Mitigating DRAM Pressure in Managed Big Data Frameworks. - Iacovos G. Kolokasis; Giannos Evdorou; Shoaib Akram 001; Christos Kozanitis; Anastasios Papagiannis; Foivos S. Zakkak; Polyvios Pratikakis; Angelos Bilas (ACM Trans. Program. Lang. Syst., 2024)