OpenHI - An open source framework for annotating histopathological image. - Pargorn Puttapirat; Haichuan Zhang 001; Yuchen Lian; Chunbao Wang 002; Xiangrong Zhang; Lixia Yao; Chen Li 011 (BIBM, 2018)

Global Bank: A Guided Pathway of Encoding and Decoding for Pathological Image Analysis. - Hansheng Li; Jun Feng 003; Baosheng Kang; Yuxin Kang; Feihong Liu; Wenli Hui; Qirong Bo; Chunbao Wang 002; Lin Yang 002; Lei Cui 004 (BIBM, 2019)

OpenHI2 - Open source histopathological image platform. - Pargorn Puttapirat; Chen Li 011; Haichuan Zhang 001; Jingyi Deng; Yuxin Dong; Jiangbo Shi; Hongyu He; Zeyu Gao 001; Chunbao Wang 002; Xiangrong Zhang (BIBM, 2019)

Effects of annotation granularity in deep learning models for histopathological images. - Jiangbo Shi; Zeyu Gao 001; Haichuan Zhang 001; Pargorn Puttapirat; Chunbao Wang 002; Xiangrong Zhang; Chen Li 011 (BIBM, 2019)

Comparing digital histology slides with multiple staining based on decoloring and dyeing technique. - Chunbao Wang 002; Zhe Yang; Kai Wang; Pargorn Puttapirat; Chen Li 011; Guanjun Zhang (BIBM, 2019)

OpenHI: open platform for histopathological image annotation. - Pargorn Puttapirat; Haichuan Zhang 001; Jingyi Deng; Yuxin Dong; Jiangbo Shi; Peiliang Lou; Chunbao Wang 002; Lixia Yao; Xiangrong Zhang; Chen Li 011 (Int. J. Data Min. Bioinform., 2019)

Pathologist-level interpretable whole-slide cancer diagnosis with deep learning. - Zizhao Zhang; Pingjun Chen; Mason McGough; Fuyong Xing; Chunbao Wang 002; Marilyn Bui; Yuanpu Xie; Manish Sapkota; Lei Cui 004; Jaspreet Singh Dhillon; Nazeel Ahmad; Farah K. Khalil; et al. (Nat. Mach. Intell., 2019)

Publisher Correction: Pathologist-level interpretable whole-slide cancer diagnosis with deep learning. - Zizhao Zhang; Pingjun Chen; Mason McGough; Fuyong Xing; Chunbao Wang 002; Marilyn Bui; Yuanpu Xie; Manish Sapkota; Lei Cui 004; Jasreman Dhillon; Nazeel Ahmad; Farah K. Khalil; et al. (Nat. Mach. Intell., 2019)

Structured Information Extraction of Pathology Reports with Attention-based Graph Convolutional Network. - Jialun Wu; Kaiwen Tang; Haichuan Zhang 001; Chunbao Wang 002; Chen Li 011 (BIBM, 2020)

Meta Mask Correction for Nuclei Segmentation in Histopathological Image. - Jiangbo Shi; Chang Jia; Zeyu Gao 001; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (BIBM, 2021)

PIMIP: An Open Source Platform for Pathology Information Management and Integration. - Jialun Wu; Anyu Mao; Xinrui Bao; Haichuan Zhang 001; Zeyu Gao 001; Chunbao Wang 002; Tieliang Gong; Chen Li 011 (BIBM, 2021)

A Precision Diagnostic Framework of Renal Cell Carcinoma on Whole-Slide Images using Deep Learning. - Jialun Wu; Ruonan Zhang; Tieliang Gong; Xinrui Bao; Zeyu Gao 001; Haichuan Zhang 001; Chunbao Wang 002; Chen Li 011 (BIBM, 2021)

BioIE: Biomedical Information Extraction with Multi-head Attention Enhanced Graph Convolutional Network. - Jialun Wu; Ruonan Zhang; Tieliang Gong; Yang Liu; Chunbao Wang 002; Chen Li 011 (BIBM, 2021)

A Personalized Diagnostic Generation Framework Based on Multi-source Heterogeneous Data. - Jialun Wu; Ruonan Zhang; Tieliang Gong; Haichuan Zhang 001; Chunbao Wang 002; Chen Li 011 (BIBM, 2021)

Instance-Based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image. - Zeyu Gao 001; Bangyang Hong; Xianli Zhang; Yang Li 139; Chang Jia; Jialun Wu; Chunbao Wang 002; Deyu Meng; Chen Li 011 (MICCAI (8), 2021)

Nuclei Grading of Clear Cell Renal Cell Carcinoma in Histopathological Image by Composite High-Resolution Network. - Zeyu Gao 001; Jiangbo Shi; Xianli Zhang; Yang Li 139; Haichuan Zhang 001; Jialun Wu; Chunbao Wang 002; Deyu Meng; Chen Li 011 (MICCAI (8), 2021)

A Precision Diagnostic Framework of Renal Cell Carcinoma on Whole-Slide Images using Deep Learning. - Jialun Wu; Haichuan Zhang 001; Zeyu Gao 001; Xinrui Bao; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (CoRR, 2021)

A Personalized Diagnostic Generation Framework Based on Multi-source Heterogeneous Data. - Jialun Wu; Zeyu Gao 001; Haichuan Zhang 001; Ruonan Zhang; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (CoRR, 2021)

BioIE: Biomedical Information Extraction with Multi-head Attention Enhanced Graph Convolutional Network. - Jialun Wu; Yang Liu; Zeyu Gao 001; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (CoRR, 2021)

Uncertainty-based Model Acceleration for Cancer Classification in Whole-Slide Images. - Zeyu Gao 001; Anyu Mao; Jialun Wu; Yang Li 139; Chunbao Wang 002; Caixia Ding; Tieliang Gong; Chen Li 011 (BIBM, 2022)

A Novel Encoding and Decoding Calibration Guiding Pathway for Pathological Image Analysis. - Hansheng Li; Jianping Li; Yuxin Kang; Chunbao Wang 002; Feihong Liu; Wenli Hui; Qirong Bo; Lei Cui 004; Jun Feng 003; Lin Yang 002 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Unsupervised Representation Learning for Tissue Segmentation in Histopathological Images: From Global to Local Contrast. - Zeyu Gao 001; Chang Jia; Yang Li 139; Xianli Zhang; Bangyang Hong; Jialun Wu; Tieliang Gong; Chunbao Wang 002; Deyu Meng; Yefeng Zheng 001; Chen Li 011 (IEEE Trans. Medical Imaging, 2022)

A semi-supervised multi-task learning framework for cancer classification with weak annotation in whole-slide images. - Zeyu Gao 001; Bangyang Hong; Yang Li 139; Xianli Zhang; Jialun Wu; Chunbao Wang 002; Xiangrong Zhang; Tieliang Gong; Yefeng Zheng 001; Deyu Meng; Chen Li 011 (Medical Image Anal., 2023)

Semi-Supervised Pixel Contrastive Learning Framework for Tissue Segmentation in Histopathological Image. - Jiangbo Shi; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (IEEE J. Biomed. Health Informatics, 2023)

A Structure-Aware Hierarchical Graph-Based Multiple Instance Learning Framework for pT Staging in Histopathological Image. - Jiangbo Shi; Lufei Tang; Yang Li 139; Xianli Zhang; Zeyu Gao 001; Yefeng Zheng 001; Chunbao Wang 002; Tieliang Gong; Chen Li 011 (IEEE Trans. Medical Imaging, 2023)

MG-Trans: Multi-Scale Graph Transformer With Information Bottleneck for Whole Slide Image Classification. - Jiangbo Shi; Lufei Tang; Zeyu Gao 001; Yang Li 139; Chunbao Wang 002; Tieliang Gong; Chen Li 011; Huazhu Fu (IEEE Trans. Medical Imaging, 2023)

CoD-MIL: Chain-of-Diagnosis Prompting Multiple Instance Learning for Whole Slide Image Classification. - Jiangbo Shi; Chen Li 011; Tieliang Gong; Chunbao Wang 002; Huazhu Fu (IEEE Trans. Medical Imaging, 2025)