Transcriptome Comparisons of Multi-Species Identify Differential Genome Activation of Mammals Embryogenesis. - Chunshen Long; Wei Li 068; Pengfei Liang; Shuai Liu 002; Yongchun Zuo (IEEE Access, 2019)

HelPredictor models single-cell transcriptome to predict human embryo lineage allocation. - Pengfei Liang; Lei Zheng; Chunshen Long; Wuritu Yang; Lei Yang; Yongchun Zuo (Briefings Bioinform., 2021)

eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition. - Hao Wang 109; Pengfei Liang; Lei Zheng; Chunshen Long; Hanshuang Li; Yongchun Zuo (Bioinform., 2021)

EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis. - Lei Zheng; Pengfei Liang; Chunshen Long; Haicheng Li; Hanshuang Li; Yuchao Liang; Xiang He; Qilemuge Xi; Yongqiang Xing; Yongchun Zuo (Nucleic Acids Res., 2023)

SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network. - Zhihao Si; Hanshuang Li; Wenjing Shang; Yanan Zhao; Lingjiao Kong; Chunshen Long; Yongchun Zuo; Zhenxing Feng (Briefings Bioinform., 2024)

Chromatin region binning of gene expression for improving embryo cell subtype identification. - Pengfei Liang; Hanshuang Li; Chunshen Long; Mingzhu Liu; Jian Zhou; Yongchun Zuo (Comput. Biol. Medicine, 2024)

Refining cell subpopulation identification and cell fate mapping using cell energy. - Chunshen Long; Hanshuang Li; Zhifang Li; Jia Zhang; Qilemuge Xi; Yongchun Zuo (Expert Syst. Appl., 2026)