SAbPred: a structure-based antibody prediction server. - James Dunbar; Konrad Krawczyk; Jinwoo Leem; Claire Marks; Jaroslaw Nowak; Cristian Regep; Guy Georges; Sebastian Kelm; Bojana Popovic; Charlotte M. Deane (Nucleic Acids Res., 2016)

Sphinx: merging knowledge-based and ab initio approaches to improve protein loop prediction. - Claire Marks; Jaroslaw Nowak; Stefan Klostermann; Guy Georges; James Dunbar; Jiye Shi; Sebastian Kelm; Charlotte M. Deane (Bioinform., 2017)

Predicting loop conformational ensembles. - Claire Marks; Jiye Shi; Charlotte M. Deane (Bioinform., 2018)

Increasing the accuracy of protein loop structure prediction with evolutionary constraints. - Claire Marks; Charlotte M. Deane (Bioinform., 2019)

TCRBuilder: multi-state T-cell receptor structure prediction. - Wing Ki Wong; Claire Marks; Jinwoo Leem; Alan P. Lewis; Jiye Shi; Charlotte M. Deane (Bioinform., 2020)

Thera-SAbDab: the Therapeutic Structural Antibody Database. - Matthew I. J. Raybould; Claire Marks; Alan P. Lewis; Jiye Shi; Alexander Bujotzek; Bruck Taddese; Charlotte M. Deane (Nucleic Acids Res., 2020)

Structural diversity of B-cell receptor repertoires along the B-cell differentiation axis in humans and mice. - Aleksandr Kovaltsuk; Matthew I. J. Raybould; Wing Ki Wong; Claire Marks; Sebastian Kelm; James Snowden; Johannes Trück; Charlotte M. Deane (PLoS Comput. Biol., 2020)

Humanization of antibodies using a machine learning approach on large-scale repertoire data. - Claire Marks; Alissa M. Hummer; Mark Chin; Charlotte M. Deane (Bioinform., 2021)

CoV-AbDab: the coronavirus antibody database. - Matthew I. J. Raybould; Aleksandr Kovaltsuk; Claire Marks; Charlotte M. Deane (Bioinform., 2021)

Public Baseline and shared response structures support the theory of antibody repertoire functional commonality. - Matthew I. J. Raybould; Claire Marks; Aleksandr Kovaltsuk; Alan P. Lewis; Jiye Shi; Charlotte M. Deane (PLoS Comput. Biol., 2021)

Epitope profiling using computational structural modelling demonstrated on coronavirus-binding antibodies. - Sarah A. Robinson; Matthew I. J. Raybould; Constantin Schneider; Wing Ki Wong; Claire Marks; Charlotte M. Deane (PLoS Comput. Biol., 2021)