Spatial composition using cases: IDIOM. - Ian F. C. Smith; Claudio Lottaz; Boi Faltings (ICCBR, 1995)

Constraint techniques for collaborative design. - Claudio Lottaz; Djamila Sam-Haroud; Boi Faltings; Ian F. C. Smith (ICTAI, 1998)

Constraint solving and preference activation for interactive design. - Claudio Lottaz; Ruth Stalker; Ian F. C. Smith (Artif. Intell. Eng. Des. Anal. Manuf., 1998)

Rewriting Numeric Constraint Satisfaction Problems for Consistency Algorithms. - Claudio Lottaz (CP, 1999)

Constraint-based support for negotiation in collaborative design. - Claudio Lottaz; Ian F. C. Smith; Yvan Robert-Nicoud; Boi Faltings (Artif. Intell. Eng., 2000)

Increasing Understanding During Collaboration Through Advanced Representations. - Claudio Lottaz; Rudi Stouffs; Ian F. C. Smith (J. Inf. Technol. Constr., 2000)

Modeling sequencing errors by combining Hidden Markov models. - Claudio Lottaz; Christian Iseli; C. Victor Jongeneel; Philipp Bucher (ECCB, 2003)

Molecular decomposition of complex clinical phenotypes using biologically structured analysis of microarray data. - Claudio Lottaz; Rainer Spang (Bioinform., 2005)

stam - a Bioconductor compliant R package for structured analysis of microarray data. - Claudio Lottaz; Rainer Spang (BMC Bioinform., 2005)

OrderedList - a bioconductor package for detecting similarity in ordered gene lists. - Claudio Lottaz; Xinan Yang; Stefanie Scheid; Rainer Spang (Bioinform., 2006)

Annotation-based distance measures for patient subgroup discovery in clinical microarray studies. - Claudio Lottaz; Joern Toedling; Rainer Spang (Bioinform., 2007)

ReseqChip: Automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly. - Marian Thieme; Claudio Lottaz; Harald Niederstätter; Walther Parson; Rainer Spang; Peter J. Oefner (BMC Bioinform., 2009)

EasyStrata: evaluation and visualization of stratified genome-wide association meta-analysis data. - Thomas W. Winkler; Zoltán Kutalik; Mathias Gorski; Claudio Lottaz; Florian Kronenberg; Iris M. Heid (Bioinform., 2015)

FastqPuri: high-performance preprocessing of RNA-seq data. - Paula Pérez-Rubio; Claudio Lottaz; Julia C. Engelmann (BMC Bioinform., 2019)