Using Sequence Motifs for Enhanced Neural Network Prediction of Protein Distance Constraints. - Jan Gorodkin; Ole Lund; Claus A. F. Andersen; Søren Brunak (ISMB, 1999)

Protein β-Sheet Partner Prediction by Neural Networks. - Pierre Baldi; Gianluca Pollastri; Claus A. F. Andersen; Søren Brunak (ANNIMAB, 2000)

Matching Protein b-Sheet Partners by Feedforward and Recurrent Neural Networks. - Pierre Baldi; Gianluca Pollastri; Claus A. F. Andersen; Søren Brunak (ISMB, 2000)

Assessing the accuracy of prediction algorithms for classification: an overview. - Pierre Baldi; Søren Brunak; Yves Chauvin; Claus A. F. Andersen; Henrik Nielsen (Bioinform., 2000)

DSSPcont: continuous secondary structure assignments for proteins. - Phil Carter; Claus A. F. Andersen; Burkhard Rost (Nucleic Acids Res., 2003)

Representation of Protein-Sequence Information by Amino Acid Subalphabets. - Claus A. F. Andersen; Søren Brunak (AI Mag., 2004)