In vivo detection limits of magnetically labeled embryonic stem cells in the rat brain using high-field (17.6 T) magnetic resonance imaging. - Albrecht Stroh; Cornelius Faber; Thomas Neuberger; Peer Lorenz; Katharina Sieland; Peter M. Jakob; Andrew Webb; Herbert Pilgrimm; Ralf Schober; Elena E. Pohl; Claus Zimmer (NeuroImage, 2005)

Tracking of systemically administered mononuclear cells in the ischemic brain by high-field magnetic resonance imaging. - Albrecht Stroh; Claus Zimmer; Nikos Werner; Karen Gertz; Kathrine Weir; Golo Kronenberg; Jens Steinbrink; Susanne Müller; Katharina Sieland; Ulrich Dirnagl; Georg Nickenig; Matthias Endres (NeuroImage, 2006)

A new device for tactile stimulation during fMRI. - Christian Dresel; Andreas Parzinger; Christoph Rimpau; Claus Zimmer; Andres O. Ceballos-Baumann; Bernhard Haslinger (NeuroImage, 2008)

An automated tool for detection of FLAIR-hyperintense white-matter lesions in Multiple Sclerosis. - Paul Schmidt; Christian Gaser; Milan Arsic; Dorothea Buck; Annette Förschler; Achim Berthele; Muna Hoshi; Rüdiger Ilg; Volker J. Schmid; Claus Zimmer; Bernhard Hemmer; Mark Mühlau (NeuroImage, 2012)

Selectively and progressively disrupted structural connectivity of functional brain networks in Alzheimer's disease - Revealed by a novel framework to analyze edge distributions of networks detecting disruptions with strong statistical evidence. - Klaus Hahn; Nicholas Myers; Sergei Prigarin; Karsten Rodenacker; Alexander Kurz 002; Hans Förstl; Claus Zimmer; Afra M. Wohlschläger; Christian Sorg (NeuroImage, 2013)

Intrinsic Brain Activity of Cognitively Normal Older Persons Resembles More That of Patients Both with and at Risk for Alzheimer's Disease Than That of Healthy Younger Persons. - Lorenzo Pasquini; Annika Tonch; Claudia Plant; Andrew Zherdin; Marion Ortner; Alexander Kurz 002; Hans Förstl; Claus Zimmer; Timo Grimmer; Afra M. Wohlschläger; Valentin Riedl; Christian Sorg (Brain Connect., 2014)

Language and its right-hemispheric distribution in healthy brains: An investigation by repetitive transcranial magnetic stimulation. - Nico Sollmann; Noriko Tanigawa; Florian Ringel; Claus Zimmer; Bernhard Meyer; Sandro M. Krieg (NeuroImage, 2014)

A Nonparametric Growth Model for Brain Tumor Segmentation in Longitudinal MR Sequences. - Esther Alberts; Guillaume Charpiat; Yuliya Tarabalka; Thomas Huber; Marc-André Weber; Jan S. Bauer; Claus Zimmer; Bjoern H. Menze (Brainles@MICCAI, 2015)

Cognitive emotion regulation enhances aversive prediction error activity while reducing emotional responses. - Satja Mulej Bratec; Xiyao Xie; Gabriele Schmid; Anselm Doll; Leonhard Schilbach; Claus Zimmer; Afra M. Wohlschläger; Valentin Riedl; Christian Sorg (NeuroImage, 2015)

Uncertainty quantification in brain tumor segmentation using CRFs and random perturbation models. - Esther Alberts; Markus Rempfler; Georgina Alber; Thomas Huber; Jan Kirschke; Claus Zimmer; Bjoern H. Menze (ISBI, 2016)

Intra- and interscanner variability of magnetic resonance imaging based volumetry in multiple sclerosis. - Viola Biberacher; Paul Schmidt; Anisha Keshavan; Christine C. Boucard; Ruthger Righart; Philipp G. Sämann; Christine Preibisch; Daniel Fröbel; Lilian Aly; Bernhard Hemmer; Claus Zimmer; Roland G. Henry; et al. (NeuroImage, 2016)

Power estimation for non-standardized multisite studies. - Anisha Keshavan; Friedemann Paul; Mona K. Beyer; Alyssa H. Zhu; Nico Papinutto; Russell T. Shinohara; William Stern; Michael Amann; Rohit Bakshi; Antje Bischof; Alessandro Carriero; Manuel Comabella; et al. (NeuroImage, 2016)

Extensive learning is associated with gray matter changes in the right hippocampus. - Kathrin Koch; Tim Jonas Reess; Oana Georgiana Rus; Claus Zimmer (NeuroImage, 2016)

How do you make me feel better? Social cognitive emotion regulation and the default mode network. - Xiyao Xie; Satja Mulej Bratec; Gabriele Schmid; Chun Meng; Anselm Doll; Afra M. Wohlschläger; Kathrin Finke; Hans Förstl; Claus Zimmer; Reinhard Pekrun; Leonhard Schilbach; Valentin Riedl; et al. (NeuroImage, 2016)

Multi-modal Image Classification Using Low-Dimensional Texture Features for Genomic Brain Tumor Recognition. - Esther Alberts; Giles Tetteh; Stefano Trebeschi; Marie Bieth; Alexander Valentinitsch; Benedikt Wiestler; Claus Zimmer; Bjoern H. Menze (GRAIL/MFCA/MICGen@MICCAI, 2017)

Deep-FExt: Deep Feature Extraction for Vessel Segmentation and Centerline Prediction. - Giles Tetteh; Markus Rempfler; Claus Zimmer; Bjoern H. Menze (MLMI@MICCAI, 2017)

Cognitive emotion regulation modulates the balance of competing influences on ventral striatal aversive prediction error signals. - Satja Mulej Bratec; Xiyao Xie; Yijun Wang; Leonhard Schilbach; Claus Zimmer; Afra M. Wohlschläger; Valentin Riedl; Christian Sorg (NeuroImage, 2017)

DeepVesselNet: Vessel Segmentation, Centerline Prediction, and Bifurcation Detection in 3-D Angiographic Volumes. - Giles Tetteh; Velizar Efremov; Nils D. Forkert; Matthias Schneider 002; Jan Kirschke; Bruno Weber; Claus Zimmer; Marie Piraud; Bjoern H. Menze (CoRR, 2018)

A Baseline for Predicting Glioblastoma Patient Survival Time with Classical Statistical Models and Primitive Features Ignoring Image Information. - Florian Kofler; Johannes C. Paetzold; Ivan Ezhov; Suprosanna Shit; Daniel Krahulec; Jan S. Kirschke; Claus Zimmer; Benedikt Wiestler; Bjoern H. Menze (BrainLes@MICCAI (1), 2019)

An analysis of MRI derived cortical complexity in premature-born adults: Regional patterns, risk factors, and potential significance. - Dennis M. Hedderich; Josef G. Bäuml; Aurore Menegaux; Mihai Avram 003; Marcel Daamen; Claus Zimmer; Peter Bartmann; Lukas Scheef; Henning Boecker; Dieter Wolke; Christian Gaser; Christian Sorg (NeuroImage, 2020)

Human subsystems of medial temporal lobes extend locally to amygdala nuclei and globally to an allostatic-interoceptive system. - Adriana L. Ruiz-Rizzo; Florian Beissner; Kathrin Finke; Hermann J. Müller; Claus Zimmer; Lorenzo Pasquini; Christian Sorg (NeuroImage, 2020)

FedCostWAvg: A New Averaging for Better Federated Learning. - Leon Mächler; Ivan Ezhov; Florian Kofler; Suprosanna Shit; Johannes C. Paetzold; Timo Loehr; Claus Zimmer; Benedikt Wiestler; Bjoern H. Menze (BrainLes@MICCAI (2), 2021)

Structured reporting of brain MRI following mechanical thrombectomy in acute ischemic stroke patients. - Sebastian Mönch; Tiberiu Andrisan; Kathleen Bernkopf; Benno Ikenberg; Benjamin M. Friedrich; Claus Zimmer; Dennis M. Hedderich (BMC Medical Imaging, 2021)

Are we using appropriate segmentation metrics? Identifying correlates of human expert perception for CNN training beyond rolling the DICE coefficient. - Florian Kofler; Ivan Ezhov; Fabian Isensee; Fabian Balsiger; Christoph Berger; Maximilian Koerner; Johannes C. Paetzold; Hongwei Li 004; Suprosanna Shit; Richard McKinley; Spyridon Bakas; Claus Zimmer; et al. (CoRR, 2021)

A Computed Tomography Vertebral Segmentation Dataset with Anatomical Variations and Multi-Vendor Scanner Data. - Hans Liebl; David Schinz; Anjany Sekuboyina; Luca Malagutti; Maximilian T. Löffler; Amirhossein Bayat; Malek El Husseini; Giles Tetteh; Katharina Grau; Eva Niederreiter; Thomas Baum; Benedikt Wiestler; et al. (CoRR, 2021)

A Deep Learning Approach to Predicting Collateral Flow in Stroke Patients Using Radiomic Features from Perfusion Images. - Giles Tetteh; Fernando Navarro; Johannes C. Paetzold; Jan Kirschke; Claus Zimmer; Bjoern H. Menze (CoRR, 2021)

Deep Quality Estimation: Creating Surrogate Models for Human Quality Ratings. - Florian Kofler; Ivan Ezhov; Lucas Fidon; Izabela Horvath; Ezequiel de la Rosa; John LaMaster; Hongwei Li 004; Tom Finck; Suprosanna Shit; Johannes C. Paetzold; Spyridon Bakas; Marie Piraud; et al. (BrainLes@MICCAI, 2022)

ISLES 2022: A multi-center magnetic resonance imaging stroke lesion segmentation dataset. - Moritz Roman Hernandez Petzsche; Ezequiel de la Rosa; Uta Hanning; Roland Wiest; Waldo Enrique Valenzuela Pinilla; Mauricio Reyes 001; Maria Inês Meyer; Sook-Lei Liew; Florian Kofler; Ivan Ezhov; David Robben; Alexandre Hutton; et al. (CoRR, 2022)

Resting-state BOLD functional connectivity depends on the heterogeneity of capillary transit times in the human brain A combined lesion and simulation study about the influence of blood flow response timing. - Sebastian C. Schneider; Mario E. Archila-Meléndez; Jens Göttler; Stephan Kaczmarz; Benedikt Zott; Josef Priller; Michael Kallmayer; Claus Zimmer; Christian Sorg; Christine Preibisch (NeuroImage, 2022)

blob loss: Instance Imbalance Aware Loss Functions for Semantic Segmentation. - Florian Kofler; Suprosanna Shit; Ivan Ezhov; Lucas Fidon; Izabela Horvath; Rami Al-Maskari; Hongwei Bran Li; Harsharan Bhatia; Timo Loehr; Marie Piraud; Ali Ertürk; Jan Kirschke; et al. (IPMI, 2023)

Approaching Peak Ground Truth. - Florian Kofler; Johannes Wahle; Ivan Ezhov; Sophia J. Wagner; Rami Al-Maskari; Emilia Gryska; Mihail I. Todorov; Christina Bukas; Felix Meissen; Tingying Peng; Ali Ertürk; Daniel Rueckert; et al. (ISBI, 2023)

Stronger influence of systemic than local hemodynamic-vascular factors on resting-state BOLD functional connectivity. - Sebastian C. Schneider; Stephan Kaczmarz; Jens Göttler; Jan Kufer; Benedikt Zott; Josef Priller; Michael Kallmayer; Claus Zimmer; Christian Sorg; Christine Preibisch (NeuroImage, 2023)

MLV2-Net: Rater-Based Majority-Label Voting for Consistent Meningeal Lymphatic Vessel Segmentation. - Fabian Bongratz; Markus Karmann; Adrian Holz; Moritz Bonhoeffer; Viktor Neumaier; Sarah Deli; Benita Schmitz-Koep; Claus Zimmer; Christian Sorg; Melissa Thalhammer; Dennis M. Hedderich; Christian Wachinger (ML4H@NeurIPS, 2024)

ISLES 2024: The first longitudinal multimodal multi-center real-world dataset in (sub-)acute stroke. - Evamaria Olga Riedel; Ezequiel de la Rosa; The Anh Baran; Moritz Roman Hernandez Petzsche; Hakim Baazaoui; Kaiyuan Yang 003; David Robben; Joaquin Oscar Seia; Roland Wiest; Mauricio Reyes 001; Ruisheng Su; Claus Zimmer; et al. (CoRR, 2024)

MLV2-Net: Rater-Based Majority-Label Voting for Consistent Meningeal Lymphatic Vessel Segmentation. - Fabian Bongratz; Markus Karmann; Adrian Holz; Moritz Bonhoeffer; Viktor Neumaier; Sarah Deli; Benita Schmitz-Koep; Claus Zimmer; Christian Sorg; Melissa Thalhammer; Dennis M. Hedderich; Christian Wachinger (CoRR, 2024)

Consistently lower volumes across thalamus nuclei in very premature-born adults. - Melissa Thalhammer; Mehul Nimpal; Julia Schulz; Veronica Meedt; Aurore Menegaux; Benita Schmitz-Koep; Marcel Daamen; Henning Boecker; Claus Zimmer; Josef Priller; Dieter Wolke; Peter Bartmann; et al. (NeuroImage, 2024)

Increased coupling between global grey matter and CSF-derived fMRI signal in young adults after partial sleep deprivation - evidence from the sleepy brain study. - Cornelius Berberich; Leander Müller; Benedikt Zott; Rachel Nuttal; Gerhard Schneider 002; Claus Zimmer; Christian Sorg; Dennis M. Hedderich; Juliana Zimmermann (NeuroImage, 2025)

Towards quantitative intensity analysis of conventional T1-weighted images in multiple sclerosis. - Tun Wiltgen; Julian McGinnis; Ronja C. Berg; Cui Ci Voon; Oula Puonti; Katrin Giglhuber; Carl Ganter; Claus Zimmer; Bernhard Hemmer; Benedikt Wiestler; Jan Kirschke; Christine Preibisch; et al. (NeuroImage, 2025)

Benchmarking the diagnostic performance of open source LLMs in 1933 Eurorad case reports. - Su Hwan Kim 007; Severin Schramm; Lisa C. Adams; Rickmer Braren; Keno K. Bressem; Matthias Keicher; Paul-Sören Platzek; Karolin J. Paprottka; Claus Zimmer; Dennis M. Hedderich; Benedikt Wiestler (npj Digit. Medicine, 2025)