Reconstruction of cell population dynamics using CFSE. - Andrew Yates; Cliburn Chan; Jessica Strid; Simon Moon; Robin Callard; Andrew J. T. George; Jaroslav Stark (BMC Bioinform., 2007)

Flow: Statistics, visualization and informatics for flow cytometry. - Jacob Frelinger; Thomas B. Kepler; Cliburn Chan (Source Code Biol. Medicine, 2008)

The Multiscale Systems Immunology project: software for cell-based immunological simulation. - Faheem Mitha; Timothy A. Lucas; Feng Feng; Thomas B. Kepler; Cliburn Chan (Source Code Biol. Medicine, 2008)

Fcm - A python library for flow cytometry. - Jacob Frelinger; Adam Richards; Cliburn Chan (SciPy, 2012)

Big data in computational biology. - Cliburn Chan (XRDS, 2012)

Hierarchical Modeling for Rare Event Detection and Cell Subset Alignment across Flow Cytometry Samples. - Andrew Cron; Cécile Gouttefangeas; Jacob Frelinger; Lin Lin 003; Satwinder K. Singh; Cedrik M. Britten; Marij J. P. Welters; Sjoerd H. van der Burg; Mike West; Cliburn Chan (PLoS Comput. Biol., 2013)

bcSeq: an R package for fast sequence mapping in high-throughput shRNA and CRISPR screens. - Jiaxing Lin; Jeremy Gresham; Tongrong Wang; So Young Kim; James Alvarez; Jeffrey S. Damrauer; Scott Floyd; Joshua A. Granek; Andrew S. Allen; Cliburn Chan; Jichun Xie; Kouros Owzar (Bioinform., 2018)

fastJT: An R package for robust and efficient feature selection for machine learning and genome-wide association studies. - Jiaxing Lin; Alexander B. Sibley; Ivo D. Shterev; Andrew Nixon; Federico Innocenti; Cliburn Chan; Kouros Owzar (BMC Bioinform., 2019)

Ontology-guided segmentation and object identification for developmental mouse lung immunofluorescent images. - Anna Maria Masci; Scott White; Ben Neely; Maryanne Ardini-Polaske; Carol B. Hill; Ravi S. Misra; Bruce J. Aronow; Nathan Gaddis; Lina Yang; Susan E. Wert; Scott M. Palmer; Cliburn Chan (BMC Bioinform., 2021)

B-Lightning: using bait genes for marker gene hunting in single-cell data with complex heterogeneity. - Yiren Shao; Qi Gao; Liuyang Wang; Dongmei Li; Andrew B. Nixon; Cliburn Chan; Qi-Jing Li; Jichun Xie (Briefings Bioinform., 2024)

Cocaine Use Prediction With Tensor-Based Machine Learning on Multimodal MRI Connectome Data. - Anru R. Zhang; Ryan P. Bell; Chen An; Runshi Tang; Shana A. Hall; Cliburn Chan; Kareem Al-Khalil; Christina S. Meade (Neural Comput., 2024)