Physiology-based modeling of cortical auditory evoked potentials. - Cliff C. Kerr; Christopher J. Rennie; Peter A. Robinson (Biol. Cybern., 2008)

Thalamocortical changes in major depression probed by deconvolution and physiology-based modeling. - Cliff C. Kerr; Andrew H. Kemp 002; Christopher J. Rennie; Peter A. Robinson (NeuroImage, 2011)

Cortical information flow in Parkinson's disease: a composite network/field model. - Cliff C. Kerr; Sacha J. van Albada; Samuel A. Neymotin; George L. Chadderdon; Peter A. Robinson; William W. Lytton (Frontiers Comput. Neurosci., 2013)

Reinforcement Learning of Two-Joint Virtual Arm Reaching in a Computer Model of Sensorimotor Cortex. - Samuel A. Neymotin; George L. Chadderdon; Cliff C. Kerr; Joseph T. Francis; William W. Lytton (Neural Comput., 2013)

Motor Cortex Microcircuit Simulation Based on Brain Activity Mapping. - George L. Chadderdon; Ashutosh Mohan; Benjamin A. Suter; Samuel A. Neymotin; Cliff C. Kerr; Joseph T. Francis; Gordon M. G. Shepherd; William W. Lytton (Neural Comput., 2014)

K-complexes, spindles, and ERPs as impulse responses: unification via neural field theory. - M. S. Zobaer; R. M. Anderson; Cliff C. Kerr; Peter A. Robinson; K. K. H. Wong; A. L. D'Rozario (Biol. Cybern., 2017)

Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis. - Salvador Dura-Bernal; Samuel A. Neymotin; Cliff C. Kerr; Subhashini Sivagnanam; Amit Majumdar 001; Joseph T. Francis; William W. Lytton (IBM J. Res. Dev., 2017)

Physiology-based ERPs in normal and abnormal states. - M. S. Zobaer; Peter A. Robinson; Cliff C. Kerr (Biol. Cybern., 2018)

Optima TB: A tool to help optimally allocate tuberculosis spending. - Lara Goscé; Gerard J. Abou Jaoude; David Jacob Kedziora; Clemens Benedikt; Azfar Hussain; Sarah Jarvis; Alena Skrahina; Dzmitry Klimuk; Henadz Hurevich; Feng Zhao; Nicole Fraser-Hurt; Nejma Cheikh; et al. (PLoS Comput. Biol., 2021)

Covasim: An agent-based model of COVID-19 dynamics and interventions. - Cliff C. Kerr; Robyn M. Stuart; Dina Mistry; Romesh G. Abeysuriya; Katherine Rosenfeld; Gregory R. Hart; Rafael C. Núñez; Jamie A. Cohen; Prashanth Selvaraj; Brittany Hagedorn; Lauren George; Michal Jastrzebski; et al. (PLoS Comput. Biol., 2021)

Python vs. the pandemic: a case study in high-stakes software development. - Cliff C. Kerr; Robyn M. Stuart; Dina Mistry; Romesh G. Abeysuriya; Jamie A. Cohen; Lauren George; Michal Jastrzebski; Michael Famulare; Edward A. Wenger; Daniel J. Klein (SciPy, 2022)

Sciris: Simplifying scientific software in Python. - Cliff C. Kerr; Paula Sanz-Leon; Romesh G. Abeysuriya; George L. Chadderdon; Vlad-Stefan Harbuz; Parham Saidi; Maria Mar del Quiroga; Rowan Martin-Hughes; Sherrie L. Kelly; Jamie A. Cohen; Robyn M. Stuart; Anna Nachesa (J. Open Source Softw., 2023)

HPVsim: An agent-based model of HPV transmission and cervical disease. - Robyn M. Stuart; Jamie A. Cohen; Cliff C. Kerr; Prashant Mathur; Romesh G. Abeysuriya; Marita Zimmermann; Darcy W. Rao; Mariah C. Boudreau; Serin Lee; Luojun Yang; Daniel J. Klein (PLoS Comput. Biol., 2024)