Amplitude spectrum distance: measuring the global shape divergence of protein fragments. - Clovis Galiez; François Coste (BMC Bioinform., 2015)

Fragments structuraux : comparaison, prédictibilité à partir de la séquence et application à l'identification de protéines de virus. (Structural fragments : comparison, predictability from the sequence and application to the identification of viral structural proteins). - Clovis Galiez (2015)

VIRALpro: a tool to identify viral capsid and tail sequences. - Clovis Galiez; Christophe N. Magnan; François Coste; Pierre Baldi (Bioinform., 2016)

WIsH: who is the host? Predicting prokaryotic hosts from metagenomic phage contigs. - Clovis Galiez; Matthias Siebert; François Enault; Jonathan Vincent; Johannes Söding (Bioinform., 2017)

Uniclust databases of clustered and deeply annotated protein sequences and alignments. - Milot Mirdita; Lars von den Driesch; Clovis Galiez; Maria Jesus Martin; Johannes Söding; Martin Steinegger (Nucleic Acids Res., 2017)

Generalization of iterative sampling in autoencoders. - Miguel Solinas; Clovis Galiez; Romain Cohendet; Stephane Rousset; Marina Reyboz; Martial Mermillod (ICMLA, 2020)

SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. - Ruoshi Zhang; Milot Mirdita; Eli Levy Karin; Clovis Norroy; Clovis Galiez; Johannes Söding (Bioinform., 2021)