A Relational Approach for Pathway Analysis. - Cody Ashby; Xiuzhen Huang; Jeff Jenness; Joseph Kerby (IMSCCS, 2008)

Analyzing genetic factors involved in recombinant protein expression enhancement. - Daniel Johnson; Keat Teoh; Cody Ashby; Elizabeth Hood; Xiuzhen Huang (BIBM Workshops, 2010)

Study of Protein Structure Alignment Problem in Parameterized Computation. - Cody Ashby; Kun Wang; Carole L. Cramer; Xiuzhen Huang (BIOINFORMATICS, 2012)

A Unified Adaptive Co-identification Framework for High-D Expression Data. - Shuzhong Zhang; Kun Wang; Cody Ashby; Bilian Chen; Xiuzhen Huang (PRIB, 2012)

TarPan: an easily adaptable targeted sequencing panel viewer for research and clinical use. - Cody Ashby; Michael W. Rutherford; Michael A. Bauer 002; Erich A. Peterson; Yan Wang; Eileen M. Boyle; Christopher Paul Wardell; Brian A. Walker (BMC Bioinform., 2020)

FiNGS: high quality somatic mutations using filters for next generation sequencing. - Christopher Paul Wardell; Cody Ashby; Michael Anton Bauer (BMC Bioinform., 2021)