Semantic enrichment of journal articles using chemical named entity recognition. - Colin R. Batchelor; Peter T. Corbett (ACL, 2007)

Annotation of Chemical Named Entities. - Peter T. Corbett; Colin R. Batchelor; Simone Teufel (BioNLP@ACL, 2007)

An Upper-Level Ontology for Chemistry. - Colin R. Batchelor (FOIS, 2008)

Towards Domain-Independent Argumentative Zoning: Evidence from Chemistry and Computational Linguistics. - Simone Teufel; Advaith Siddharthan; Colin R. Batchelor (EMNLP, 2009)

Ontological dependence, dispositions and institutional reality in chemistry. - Colin R. Batchelor; Janna Hastings; Christoph Steinbeck (FOIS, 2010)

What are chemical structures and their relations? - Janna Hastings; Colin R. Batchelor; Christoph Steinbeck; Stefan Schulz 001 (FOIS, 2010)

Corpora for the Conceptualisation and Zoning of Scientific Papers. - Maria Liakata; Simone Teufel; Advaith Siddharthan; Colin R. Batchelor (LREC, 2010)

What's in an 'is about' Link? Chemical Diagrams and the Information Artifact Ontology. - Janna Hastings; Colin R. Batchelor; Fabian Neuhaus; Christoph Steinbeck (ICBO, 2011)

Parts and Wholes, Shapes and Holes in Living Beings. - Janna Hastings; Colin R. Batchelor; Stefan Schulz 001 (SHAPES, 2011)

Modularization Requirements in Bio-Ontologies: A Case Study of ChEbi. - Janna Hastings; Colin R. Batchelor; Christoph Steinbeck; Stefan Schulz 001 (WoMO, 2011)

The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data. - Robert Hoehndorf; Colin R. Batchelor; Thomas Bittner; Michel Dumontier; Karen Eilbeck; Rob Knight 001; Chris Mungall; Jane S. Richardson; Jesse Stombaugh; Eric Westhof; Craig L. Zirbel; Neocles Leontis (Appl. Ontology, 2011)

The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside. - Joanne S. Luciano; Bosse Andersson; Colin R. Batchelor; Olivier Bodenreider; Tim Clark; Christine K. Denney; Christopher Domarew; Thomas Gambet; Lee Harland; Anja Jentzsch; Vipul Kashyap; Peter J. Kos; et al. (J. Biomed. Semant., 2011)

Evolution of the Sequence Ontology terms and relationships. - Christopher J. Mungall; Colin R. Batchelor; Karen Eilbeck (J. Biomed. Informatics, 2011)

Waves and fields in bio-ontologies. - Colin R. Batchelor; Janna Hastings (ICBO, 2012)

Automatic recognition of conceptualization zones in scientific articles and two life science applications. - Maria Liakata; Shyamasree Saha; Simon Dobnik; Colin R. Batchelor; Dietrich Rebholz-Schuhmann (Bioinform., 2012)

Semantics vs. statistics in chemical markup. - Colin R. Batchelor (J. Cheminformatics, 2012)

Structure-based classification and ontology in chemistry. - Janna Hastings; Despoina Magka; Colin R. Batchelor; Lian Duan; Robert Stevens 001; Marcus Ennis; Christoph Steinbeck (J. Cheminformatics, 2012)

A Discourse-Driven Content Model for Summarising Scientific Articles Evaluated in a Complex Question Answering Task. - Maria Liakata; Simon Dobnik; Shyamasree Saha; Colin R. Batchelor; Dietrich Rebholz-Schuhmann (EMNLP, 2013)

Shape Perception in Chemistry. - Janna Hastings; Colin R. Batchelor; Mitsuhiro Okada (SHAPES, 2013)

Scientific Lenses to Support Multiple Views over Linked Chemistry Data. - Colin R. Batchelor; Christian Y. A. Brenninkmeijer; Christine Chichester; Mark Davies; Daniela Digles; Ian Dunlop; Chris T. A. Evelo; Anna Gaulton; Carole A. Goble; Alasdair J. G. Gray; Paul Groth; Lee Harland; et al. (ISWC (1), 2014)

PubChemRDF: towards the semantic annotation of PubChem compound and substance databases. - Gang Fu; Colin R. Batchelor; Michel Dumontier; Janna Hastings; Egon L. Willighagen; Evan Bolton (J. Cheminformatics, 2015)

The Chemical Validation and Standardization Platform (CVSP): large-scale automated validation of chemical structure datasets. - Karen Karapetyan; Colin R. Batchelor; David Sharpe; Valery Tkachenko; Antony J. Williams (J. Cheminformatics, 2015)

A Corpus of Very Short Scientific Summaries. - Yifan Chen; Tamara Polajnar; Colin R. Batchelor; Simone Teufel (CoNLL, 2020)