Missing value imputation for epistatic MAPs. - Colm J. Ryan; Derek Greene; Gerard Cagney; Padraig Cunningham (BMC Bioinform., 2010)

Improved functional overview of protein complexes using inferred epistatic relationships. - Colm J. Ryan; Derek Greene; Aude Guénolé; Haico van Attikum; Nevan J. Krogan; Pádraig Cunningham; Gerard Cagney (BMC Syst. Biol., 2011)

Accurate prediction of kinase-substrate networks using knowledge graphs. - Vít Novácek; Gavin McGauran; David Matallanas; Adrián Vallejo Blanco; Piero Conca; Emir Muñoz; Luca Costabello; Kamalesh Kanakaraj; Muhammad Zeeshan Nawaz; Brian Walsh; Sameh K. Mohamed; Pierre-Yves Vandenbussche; et al. (PLoS Comput. Biol., 2020)