Absolute Net Charge and the Biological Activity of Oligopeptides. - Laavanya Parthasarathi; Marc Devocelle; Chresten R. Søndergaard; Ivan Baran; Colm O'Dushlaine; Norman E. Davey; Richard J. Edwards; Niamh Moran; Dermot Kenny; Denis C. Shields (J. Chem. Inf. Model., 2006)

The SNP ratio test: pathway analysis of genome-wide association datasets. - Colm O'Dushlaine; Elaine Kenny; Elizabeth A. Heron; Ricardo Segurado; Michael Gill; Derek W. Morris; Aiden P. Corvin (Bioinform., 2009)

zCall: a rare variant caller for array-based genotyping: Genetics and population analysis. - Jacqueline I. Goldstein; Andrew Crenshaw; Jason P. Carey; George B. Grant; Jared Maguire; Menachem Fromer; Colm O'Dushlaine; Jennifer L. Moran; Kimberly Chambert; Christine Stevens; Pamela Sklar; Christina M. Hultman; et al. (Bioinform., 2012)

INRICH: interval-based enrichment analysis for genome-wide association studies. - Phil H. Lee; Colm O'Dushlaine; Brett Thomas; Shaun Purcell (Bioinform., 2012)

CLAMMS: a scalable algorithm for calling common and rare copy number variants from exome sequencing data. - Jonathan S. Packer; Evan K. Maxwell; Colm O'Dushlaine; Alexander E. Lopez; Frederick E. Dewey; Rostislav Chernomorsky; Aris Baras; John D. Overton; Lukas Habegger; Jeffrey G. Reid (Bioinform., 2016)

Synthesizing Proton-Density Fat Fraction and R2* from 2-point Dixon MRI with Generative Machine Learning. - Suma Anand; Kaiwen Xu; Colm O'Dushlaine; Sumit Mukherjee (CoRR, 2024)

Causal considerations can deterimine the utility of machine learning assisted GWAS. - Sumit Mukherjee; Zachary R. McCaw; David Amar; Rounak Dey; Thomas W. Soare; Hari Somineni; Nicholas Eriksson; Colm O'Dushlaine (CHIL, 2025)

Synthesizing Proton-Density Fat Fraction and $R_2^{ ast}$ from 2-Point Dixon MRI with Generative Machine Learning. - Suma Anand; Kaiwen Xu; Colm O'Dushlaine; Sumit Mukherjee (ISBI, 2025)