Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer. - Yanjun Xu; Tan Wu; Feng Li; Qun Dong; Jingwen Wang; Desi Shang; Yingqi Xu; Chunlong Zhang; Yiying Dou; Congxue Hu; Haixiu Yang; Xuan Zheng; et al. (Briefings Bioinform., 2020)

Identifying and characterizing drug sensitivity-related lncRNA-TF-gene regulatory triplets. - Congxue Hu; Yingqi Xu; Feng Li; Wanqi Mi; He Yu; Xinran Wang; Xin Wen; Shuaijun Chen; Xia Li 004; Yanjun Xu; Yunpeng Zhang (Briefings Bioinform., 2022)

CellMarker 2.0: an updated database of manually curated cell markers in human/mouse and web tools based on scRNA-seq data. - Congxue Hu; Tengyue Li; Yingqi Xu; Xinxin Zhang; Feng Li; Jing Bai 014; Jing Chen; Wenqi Jiang; Kaiyue Yang; Qi Ou; Xia Li 004; Peng Wang 082; et al. (Nucleic Acids Res., 2023)

Dissecting microenvironment in cystadenomas and hepatic cysts based on single nucleus RNA-sequencing data. - Congxue Hu; Yongqi Lei; Xinyang Liu; Xingxin Yu; Zhida Geng; Yu Liu; Liyu Yang; Xuehong Tie; Wenzhe Zhou; Xia Li; Yunpeng Zhang; Yingjian Liang (Comput. Biol. Medicine, 2024)