Reframing gene essentiality in terms of adaptive flexibility. - Gabriela I. Guzmán; Connor A. Olson; Ying Hefner; Patrick V. Phaneuf; Edward Catoiu; Lais B. Crepaldi; Lucas Goldschmidt Micas; Bernhard O. Palsson; Adam M. Feist (BMC Syst. Biol., 2018)

Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism. - Chuankai Cheng; Edward J. O'Brien; Douglas McCloskey; Jose Utrilla; Connor A. Olson; Ryan A. LaCroix; Troy E. Sandberg; Adam M. Feist; Bernhard O. Palsson; Zachary A. King (PLoS Comput. Biol., 2019)

Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen. - Joanne K. Liu; Colton J. Lloyd; Mahmoud M. Al-Bassam; Ali Ebrahim; Ji-Nu Kim; Connor A. Olson; Alexander Aksenov; Pieter C. Dorrestein; Karsten Zengler (PLoS Comput. Biol., 2019)

The genetic basis for adaptation of model-designed syntrophic co-cultures. - Colton J. Lloyd; Zachary A. King; Troy E. Sandberg; Ying Hefner; Connor A. Olson; Patrick V. Phaneuf; Edward J. O'Brien; Jon G. Sanders; Rodolfo A. Salido; Karenina Sanders; Caitriona Brennan; Gregory Humphrey; et al. (PLoS Comput. Biol., 2019)

Bacterial fitness landscapes stratify based on proteome allocation associated with discrete aero-types. - Ke Chen; Amitesh Anand; Connor A. Olson; Troy E. Sandberg; Ye Gao; Nathan Mih; Bernhard O. Palsson (PLoS Comput. Biol., 2021)