blend4php: a PHP API for galaxy. - Connor Wytko; Brian Soto; Stephen P. Ficklin (Database J. Biol. Databases Curation, 2017)

Tripal and Galaxy: supporting reproducible scientific workflows for community biological databases. - Shawna Spoor; Connor Wytko; Brian Soto; Ming Chen; Abdullah Almsaeed; Bradford Condon; Nic Herndon; Heidi Hough; Sook Jung; Meg Staton; Jill L. Wegrzyn; Dorrie Main; et al. (Database J. Biol. Databases Curation, 2020)

GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. - John A. Hadish; Tyler Biggs; Benjamin T. Shealy; M. Reed Bender; Coleman McKnight; Connor Wytko; Melissa C. Smith; F. Alex Feltus; Loren A. Honaas; Stephen P. Ficklin (BMC Bioinform., 2022)