Multi-Event Survival Prediction for Amyotrophic Lateral Sclerosis. - Corrado Pancotti; Giovanni Birolo; Tiziana Sanavia; Cesare Rollo; Piero Fariselli (CLEF (Working Notes), 2022)

Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset. - Corrado Pancotti; Silvia Benevenuta; Giovanni Birolo; Virginia Alberini; Valeria Repetto; Tiziana Sanavia; Emidio Capriotti; Piero Fariselli (Briefings Bioinform., 2022)

DDGun: an untrained predictor of protein stability changes upon amino acid variants. - Ludovica Montanucci; Emidio Capriotti; Giovanni Birolo; Silvia Benevenuta; Corrado Pancotti; Dennis Lal; Piero Fariselli (Nucleic Acids Res., 2022)

SYNDSURV: A simple framework for survival analysis with data distributed across multiple institutions. - Cesare Rollo; Corrado Pancotti; Giovanni Birolo; Ivan Rossi; Tiziana Sanavia; Piero Fariselli (Comput. Biol. Medicine, 2024)

VAE-Surv: A novel approach for genetic-based clustering and prognosis prediction in myelodysplastic syndromes. - Cesare Rollo; Corrado Pancotti; Flavio Sartori; Isabella Caranzano; Saverio D'Amico; Luciana Carota; Francesco Casadei; Giovanni Birolo; Luca Lanino; Elisabetta Sauta; Gianluca Asti; Alessandro Buizza; et al. (Comput. Methods Programs Biomed., 2025)

JanusDDG: A Thermodynamics-Compliant Model for Sequence-Based Protein Stability via Two-Fronts Multi-Head Attention. - Guido Barducci; Ivan Rossi; Francesco Codicè; Cesare Rollo; Valeria Repetto; Corrado Pancotti; Virginia Iannibelli; Tiziana Sanavia; Piero Fariselli (CoRR, 2025)

Sparsity is All You Need: Rethinking Biological Pathway-Informed Approaches in Deep Learning. - Isabella Caranzano; Corrado Pancotti; Cesare Rollo; Flavio Sartori; Pietro Liò; Piero Fariselli; Tiziana Sanavia (CoRR, 2025)

The specification game: rethinking the evaluation of drug response prediction for precision oncology. - Francesco Codicè; Corrado Pancotti; Cesare Rollo; Yves Moreau; Piero Fariselli; Daniele Raimondi (J. Cheminformatics, 2025)