Transcriptional and Post-transcriptional Gene Regulation by Long Non-coding RNA. - Iain M. Dykes; Costanza Emanueli (Genom. Proteom. Bioinform., 2017)

MWASTools: an R/bioconductor package for metabolome-wide association studies. - Andrea Rodriguez-Martinez; Joram M. Posma; Rafael Ayala; Ana Luísa Neves; Maryam Anwar; Enrico Petretto; Costanza Emanueli; Dominique Gauguier; Jeremy K. Nicholson; Marc-Emmanuel Dumas (Bioinform., 2018)

PPMS: A framework to Profile Primary MicroRNAs from Single-cell RNA-sequencing datasets. - Jiahui Ji; Maryam Anwar; Enrico Petretto; Costanza Emanueli; Prashant Kumar Srivastava (Briefings Bioinform., 2022)