Parallel implementation and performance of fastDNAml: a program for maximum likelihood phylogenetic inference. - Craig A. Stewart; David Hart; Donald K. Berry; Gary J. Olsen; Eric A. Wernert; William Fischer 002 (SC, 2001)

High performance computing: delivering valuable and valued services at colleges and universities. - Craig A. Stewart; Christopher S. Peebles; Mary Papakhian; John V. Samuel; David Hart; Stephen C. Simms (SIGUCCS, 2001)

Gauging IT support strategies: user needs then and now. - John V. Samuel; Christopher S. Peebles; Takuya Noguchi; Craig A. Stewart (SIGUCCS, 2002)

Parallel computing in biomedical research and the search for peta-scale biomedical applications. - Craig A. Stewart; David Hart; Ray Sheppard; Huian Li; R. Cruise; Vadim Moskvin; Lech Papiez (PARCO, 2003)

Advanced information technology support for life sciences research. - Craig A. Stewart; David Hart; Anurag Shankar; Eric A. Wernert; Richard Repasky; Mary Papakhian; Andrew D. Arenson; Gerry Bernbom (SIGUCCS, 2003)

A Global Grid for Analysis of Arthropod Evolution. - Craig A. Stewart; Rainer Keller; Richard Repasky; Matthias Hess; David Hart; Matthias S. Müller; Ray Sheppard; Uwe Wössner; Martin Aumüller 002; Huian Li; Donald K. Berry; John Colbourne (GRID, 2004)

LINPACK Performance on a Geographically Distributed Linux Cluster. - Peng Wang; George W. Turner; Daniel A. Lauer; Matthew Allen; Stephen C. Simms; David Hart; Mary Papakhian; Craig A. Stewart (IPDPS, 2004)

Introduction. - Craig A. Stewart (Commun. ACM, 2004)

PubsOnline: open source bibliography database. - Scott A. Myron; Richard Knepper; Matthew R. Link; Craig A. Stewart (SIGUCCS, 2005)

The john-e-box: fostering innovation, inclusion, and collaboration through accessible advanced visualization. - Eric A. Wernert; Mike Boyles; John N. Huffman; Jeffrey Rogers; John C. Huffman; Craig A. Stewart (Richard Tapia Celebration of Diversity in Computing Conference, 2005)

Progress Towards Petascale Applications in Biology: Status in 2006. - Craig A. Stewart; Matthias S. Müller; Malinda Lingwall (Euro-Par Workshops, 2006)

Topic 17: High-Performance Bioinformatics. - Craig A. Stewart; Michael Schroeder 001; Concettina Guerra; Akihiko Konagaya (Euro-Par, 2006)

Implementation of a Distributed Architecture for Managing Collection and Dissemination of Data for Fetal Alcohol Spectrum Disorders Research. - Andrew D. Arenson; Ludmila Bakhireva; Tina Chambers; Christina Deximo; Tatiana Foroud; Joseph B. Jacobson; Sandra Jacobson; Kenneth Lyons Jones; Sarah N. Mattson; Philip May; Elizabeth S. Moore; Kimberly Ogle; et al. (GCCB, 2006)

TeraGrid: Analysis of Organization, System Architecture, and Middleware Enabling New Types of Applications. - Charlie Catlett; William E. Allcock; Phil Andrews; Ruth A. Aydt; Ray Bair; Natasha Balac; Bryan Banister; Trish Barker; Mark Bartelt; Peter H. Beckman; Francine Berman; Gary R. Bertoline; et al. (High Performance Computing Workshop, 2006)

Poster reception - Powerful new research computing system available via the TeraGrid. - D. Scott McCaulay; Matthew R. Link; George W. Turner; David Y. Hancock; Maria Morris; Craig A. Stewart (SC, 2006)

Bandwidth challenge - All in a day's work: advancing data-intensive research with the data capacitor. - Stephen C. Simms; Matt Davy; Bret Hammond; Matthew R. Link; Craig A. Stewart; Randall Bramley; Beth A. Plale; Dennis Gannon; Mu-Hyun Baik; Scott Teige; John C. Huffman; Rick McMullen; et al. (SC, 2006)

Lecture on Progress toward Petascale Applications in Bioinformatics and Computational Biology. - Craig A. Stewart; Malinda Lingwall; David A. Bader (BIBE, 2007)

Cyberinfrastructure resources for U.S. Scholarship: the TeraGrid. - Stephen C. Simms; Craig A. Stewart; D. Scott McCaulay (SIGUCCS, 2008)

GeneIndex: An Open Source Parallel Program for Enumerating and Locating Words in a Genome. - Huian Li; David Hart; Matthias S. Müller; Ulf Markwardt; Craig A. Stewart (IJCBS, 2009)

What is cyberinfrastructure. - Craig A. Stewart; Stephen C. Simms; Beth Plale; Matthew R. Link; David Y. Hancock; Geoffrey C. Fox (SIGUCCS, 2010)

Implementation, performance, and science results from a 30.7 TFLOPS IBM BladeCenter cluster. - Craig A. Stewart; Matthew R. Link; D. Scott McCaulay; Greg Rodgers; George W. Turner; David Y. Hancock; Peng Wang; Faisal Saied; Marlon E. Pierce; Ross Aiken; Matthias S. Müller; Matthias Jurenz; et al. (Concurr. Comput. Pract. Exp., 2010)

A roadmap for using NSF cyberinfrastructure with InCommon. - Von Welch; Alan Walsh; William K. Barnett; Craig A. Stewart (TG, 2011)

Demonstrating lustre over a 100Gbps wide area network of 3, 500km. - Robert Henschel; Stephen C. Simms; David Y. Hancock; Scott Michael; Tom Johnson; Nathan Heald; Thomas William; Donald K. Berry; Matthew Allen; Richard Knepper; Matt Davy; Matthew R. Link; et al. (SC, 2012)

What is campus bridging and what is XSEDE doing about it? - Craig A. Stewart; Richard Knepper; James Ferguson; Felix Bachmann; Ian T. Foster; Andrew S. Grimshaw; Victor Hazlewood; David Lifka (XSEDE, 2012)

Rockhopper, a true HPC system built with cloud concepts. - Richard Knepper; Barbara Hallock; Craig A. Stewart; Matthew R. Link; Matthew Jacobs (CLUSTER, 2013)

Initial Findings from a Study of Best Practices and Models for Cyberinfrastructure Software Sustainability. - Craig A. Stewart; Julie Wernert; Eric A. Wernert; William K. Barnett; Von Welch (CoRR, 2013)

Performance and quality of service of data and video movement over a 100 Gbps testbed. - Michael Kluge; Stephen C. Simms; Thomas William; Robert Henschel; Andy Georgi; Christian Meyer 004; Matthias S. Müller; Craig A. Stewart; Wolfgang Wünsch; Wolfgang E. Nagel (Future Gener. Comput. Syst., 2013)

Leveraging Your Local Resources and National Cyberinfrastructure Resources without Tears. - Barbara Hallock; Richard Knepper; James Ferguson; Craig A. Stewart (SIGUCCS, 2014)

Methods For Creating XSEDE Compatible Clusters. - Jeremy Fischer; Richard Knepper; Matthew Standish; Craig A. Stewart; Resa Alvord; David Lifka; Barbara Hallock; Victor Hazlewood (XSEDE, 2014)

XSEDE Campus Bridging Pilot Case Study. - Barbara Hallock; Richard Knepper; James Ferguson; Craig A. Stewart (XSEDE, 2014)

XCBC and XNIT - Tools for Cluster Implementation and Management in Research and Training. - Jeremy Fischer; Eric Coulter; Richard Knepper; Charles Peck 002; Craig A. Stewart (CLUSTER, 2015)

Jetstream: A Distributed Cloud Infrastructure for Underresourced higher education communities. - Jeremy Fischer; Steven Tuecke; Ian T. Foster; Craig A. Stewart (SCREAM@HPDC, 2015)

Sustained Software for Cyberinfrastructure: Analyses of Successful Efforts with a Focus on NSF-funded Software. - Craig A. Stewart; William K. Barnett; Eric A. Wernert; Julie A. Wernert; Von Welch; Richard Knepper (SCREAM@HPDC, 2015)

Jetstream: a self-provisioned, scalable science and engineering cloud environment. - Craig A. Stewart; Timothy M. Cockerill; Ian T. Foster; David Y. Hancock; Nirav C. Merchant; Edwin Skidmore; Daniel Stanzione; James Taylor 001; Steven Tuecke; George W. Turner; Matthew Vaughn; Niall I. Gaffney (XSEDE, 2015)

XSEDE value added, cost avoidance, and return on investment. - Craig A. Stewart; Ralph Roskies; Richard Knepper; Richard Lee Moore; Justin Whitt; Timothy Cockerill (XSEDE, 2015)

Cyberinfrastructure resources enabling creation of the loblolly pine reference transcriptome. - Le-Shin Wu; Carrie L. Ganote; Thomas G. Doak; William K. Barnett; Keithanne Mockaitis; Craig A. Stewart (XSEDE, 2015)

Campus Compute Co-operative (CCC): A service oriented cloud federation. - Andrew S. Grimshaw; Md Anindya Prodhan; Alexander Thomas; Craig A. Stewart; Richard Knepper (eScience, 2016)

Innovations from the early user phase on the Jetstream Research Cloud. - Richard Knepper; Jeremy Fischer; Craig A. Stewart; David Y. Hancock; Matthew R. Link (FedCSIS (Position Papers), 2016)

Cyberinfrastructure as a Platform to Facilitate Effective Collaboration between Institutions and Support Collaboratories. - Eric Coulter; Jeremy Fischer; Barbara Hallock; Richard Knepper; David Lifka; John-Paul Navarro; Marlon E. Pierce; Craig A. Stewart (SIGUCCS, 2016)

A PetaFLOPS Supercomputer as a Campus Resource: Innovation, Impact, and Models for Locally-Owned High Performance Computing at Research Colleges and Universities. - Abhinav S. Thota; Ben Fulton; Le Mai Weakley; Robert Henschel; David Y. Hancock; Matthew Allen; Jenett Tillotson; Matthew R. Link; Craig A. Stewart (SIGUCCS, 2016)

Implementation of Simple XSEDE-Like Clusters: Science Enabled and Lessons Learned. - Eric Coulter; Jeremy Fischer; Barbara Hallock; Richard Knepper; Craig A. Stewart (XSEDE, 2016)

Jetstream: performance, early experiences, and early results. - Craig A. Stewart; David Y. Hancock; Matthew Vaughn; Jeremy Fischer; Tim Cockerill; Liming Lee; Nirav C. Merchant; Therese Miller; John Michael Lowe; Daniel C. Stanzione Jr.; James Taylor 001; Edwin Skidmore (XSEDE, 2016)

Benchmarking Harp-DAAL: High Performance Hadoop on KNL Clusters. - Langshi Chen; Bo Peng 011; Bingjing Zhang; Tony Liu 001; Yiming Zou; Lei Jiang 001; Robert Henschel; Craig A. Stewart; Zhang Zhang; Emily McCallum; Zahniser Tom; Jon Omer; et al. (CLOUD, 2017)

HarpLDA+: Optimizing latent dirichlet allocation for parallel efficiency. - Bo Peng 011; Bingjing Zhang; Langshi Chen; Mihai Avram 002; Robert Henschel; Craig A. Stewart; Shaojuan Zhu; Emily McCallum; Lisa Smith; Tom Zahniser; Jon Omer; Judy Qiu (IEEE BigData, 2017)

Jetstream: A Cloud System Enabling Learning in Higher Education Communities. - Jeremy Fischer; David Y. Hancock; John Michael Lowe; George W. Turner; Winona Snapp-Childs; Craig A. Stewart (SIGUCCS, 2017)

XDMoD Value Analytics: A Tool for Measuring the Financial and Intellectual ROI of Your Campus Cyberinfrastructure Facilities. - Ben Fulton; Steven M. Gallo; Robert Henschel; Thomas Yearke; Katy Börner; Robert L. DeLeon; Thomas R. Furlani; Craig A. Stewart; Matthew R. Link (PEARC, 2017)

The Community Software Repository from XSEDE: A Resource for the National Research Community. - John-Paul Navarro; Craig A. Stewart; Richard Knepper; Lee Liming; David Lifka; Maytal Dahan (PEARC, 2017)

High Availability on Jetstream: Practices and Lessons Learned. - John Michael Lowe; Jeremy Fischer; Sanjana Sudarshan; George W. Turner; Craig A. Stewart; David Y. Hancock (ScienceCloud@HPDC, 2018)

Return on Investment for Three Cyberinfrastructure Facilities: A Local Campus Supercomputer, the NSF-Funded Jetstream Cloud System, and XSEDE (the eXtreme Science and Engineering Discovery Environment). - Craig A. Stewart; David Y. Hancock; Julie Wernert; Matthew R. Link; Nancy Wilkins-Diehr; Therese Miller; Kelly P. Gaither; Winona Snapp-Childs (UCC, 2018)

Methodologies and practices for adoption of a novel national research environment. - Jeremy Fischer; Brian W. Beck; Sanjana Sudarshan; George W. Turner; Winona Snapp-Childs; Craig A. Stewart; David Y. Hancock (PEARC, 2018)

Your Good Health is a Workforce Issue. - Craig A. Stewart; Marion Krefeldt (PEARC, 2018)

Assessment of financial returns on investments in cyberinfrastructure facilities: A survey of current methods. - Craig A. Stewart; David Y. Hancock; Julie Wernert; Thomas R. Furlani; David Lifka; Alan Sill; Nicholas Berente; Donald F. McMullen; Thomas E. Cheatham; Amy W. Apon; Ron Payne; Shawn D. Slavin (PEARC, 2019)

Jetstream - Early operations performance, adoption, and impacts. - David Y. Hancock; Craig A. Stewart; Matthew Vaughn; Jeremy Fischer; John Michael Lowe; George W. Turner; Tyson Lee Swetnam; Tyler K. Chafin; Enis Afgan; Marlon E. Pierce; Winona Snapp-Childs (Concurr. Comput. Pract. Exp., 2019)

Cloud and on-premises data center usage, expenditures, and approaches to return on investment: A survey of academic research computing organizations. - Alan Chalker; Curtis W. Hillegas; Alan Sill; Sharon Broude Geva; Craig A. Stewart (PEARC, 2020)

Results from a second longitudinal survey of academic research computing and data center usage: expenditures, utilization patterns, and approaches to return on investment. - Sharon Broude Geva; Alan Chalker; Curtis W. Hillegas; Donald Petravick; Alan Sill; Craig A. Stewart (PEARC, 2021)

Cyberinfrastructure value: a survey on perceived importance and usage. - Praneeth Chityala; Claudia M. Costa; Julie Wernert; Craig A. Stewart (PEARC, 2022)

Institutional Value of a Nobel Prize. - Sasidev Mahendran; Claudia M. Costa; Julie Wernert; Craig A. Stewart (PEARC, 2022)

Metrics of financial effectiveness: Return On Investment in XSEDE, a national cyberinfrastructure coordination and support organization. - Craig A. Stewart; Claudia M. Costa; Julie A. Wernert; David Y. Hancock; Donald F. McMullen; Philip D. Blood; Robert S. Sinkovits; Susan Mehringer; Richard Knepper; Jeremy Fischer; Marques Bland; Gary L. Rogers; et al. (PEARC, 2022)

Return on Investment in Research Cyberinfrastructure: State of the Art. - Craig A. Stewart; Julie Wernert; Claudia M. Costa; David Y. Hancock; Richard Knepper; Winona Snapp-Childs (PEARC, 2022)

Security Standards and use of Cyberinfrastructure Systems in Clinical Research. - Anurag Shankar; David Y. Hancock; Scott Michael; Laura Huber; Joseph Butler; Robert Henschel; Craig A. Stewart (PEARC, 2023)

brainlife.io: A decentralized and open source cloud platform to support neuroscience research. - Soichi Hayashi; Bradley Caron; Anibal Sólon Heinsfeld; Sophia Vinci-Booher; Brent C. McPherson; Daniel N. Bullock; Giulia Berto; J. Guiomar Niso; Sandra Hanekamp; Daniel Levitas; Lindsey Kitchell; Josiah Leong; et al. (CoRR, 2023)

Use of accounting concepts to study research: return on investment in XSEDE, a US cyberinfrastructure service. - Craig A. Stewart; Claudia M. Costa; Julie A. Wernert; Winona Snapp-Childs; Marques Bland; Philip D. Blood; Terry Campbell; Peter Couvares; Jeremy Fischer; David Y. Hancock; David L. Hart; Harmony Jankowski; et al. (Scientometrics, 2023)

Economic value of HPC experience for new STEM professionals: Insights from STEM hiring managers. - Winona Snapp-Childs; Claudia M. Costa; Daniel Olds; Addison Snell; Julie A. Wernert; Craig A. Stewart (Frontiers Res. Metrics Anal., 2024)

Evaluating Return on Investment for Cyberinfrastructure Using the International Integrated Reporting Framework. - Winona Snapp-Childs; David L. Hart; Claudia M. Costa; Julie A. Wernert; Harmony Jankowski; John Towns; Craig A. Stewart (SN Comput. Sci., 2024)

Assessing the value of advanced computing infrastructure for supporting research: new tools to inform research policy. - Winona Snapp-Childs; David Y. Hancock; Preston M. Smith; John Towns; Craig A. Stewart (CoRR, 2025)