ENCODE whole-genome data in the UCSC genome browser (2011 update). - Brian J. Raney; Melissa S. Cline; Kate R. Rosenbloom; Timothy R. Dreszer; Katrina Learned; Galt P. Barber; Laurence R. Meyer; Cricket A. Sloan; Venkat S. Malladi; Krishna M. Roskin; Bernard B. Suh; Angie S. Hinrichs; et al. (Nucleic Acids Res., 2011)

The UCSC Genome Browser database: extensions and updates 2011. - Timothy R. Dreszer; Donna Karolchik; Ann S. Zweig; Angie S. Hinrichs; Brian J. Raney; Robert M. Kuhn; Laurence R. Meyer; Matthew C. Wong; Cricket A. Sloan; Kate R. Rosenbloom; Greg Roe; Brooke L. Rhead; et al. (Nucleic Acids Res., 2012)

ENCODE whole-genome data in the UCSC Genome Browser: update 2012. - Kate R. Rosenbloom; Timothy R. Dreszer; Jeffrey C. Long; Venkat S. Malladi; Cricket A. Sloan; Brian J. Raney; Melissa S. Cline; Donna Karolchik; Galt P. Barber; Hiram Clawson; Mark Diekhans; Pauline A. Fujita; et al. (Nucleic Acids Res., 2012)

The UCSC Genome Browser database: extensions and updates 2013. - Laurence R. Meyer; Ann S. Zweig; Angie S. Hinrichs; Donna Karolchik; Robert M. Kuhn; Matthew C. Wong; Cricket A. Sloan; Kate R. Rosenbloom; Greg Roe; Brooke L. Rhead; Brian J. Raney; Andy Pohl; et al. (Nucleic Acids Res., 2013)

ENCODE Data in the UCSC Genome Browser: year 5 update. - Kate R. Rosenbloom; Cricket A. Sloan; Venkat S. Malladi; Timothy R. Dreszer; Katrina Learned; Vanessa Kirkup; Matthew C. Wong; Morgan Maddren; Ruihua Fang; Steven G. Heitner; Brian T. Lee; Galt P. Barber; et al. (Nucleic Acids Res., 2013)

The UCSC Genome Browser database: 2014 update. - Donna Karolchik; Galt P. Barber; Jonathan Casper; Hiram Clawson; Melissa S. Cline; Mark Diekhans; Timothy R. Dreszer; Pauline A. Fujita; Luvina Guruvadoo; Maximilian Haeussler; Rachel A. Harte; Steven G. Heitner; et al. (Nucleic Acids Res., 2014)

Ontology application and use at the ENCODE DCC. - Venkat S. Malladi; Drew T. Erickson; Nikhil R. Podduturi; Laurence D. Rowe; Esther T. Chan; Jean M. Davidson; Benjamin C. Hitz; Marcus Ho; Brian T. Lee; Stuart R. Miyasato; Greg R. Roe; Matt Simison; et al. (Database J. Biol. Databases Curation, 2015)

Principles of metadata organization at the ENCODE data coordination center. - Eurie L. Hong; Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Venkat S. Malladi; J. Seth Strattan; Benjamin C. Hitz; Idan Gabdank; Aditi K. Narayanan; Marcus Ho; Brian T. Lee; Laurence D. Rowe; et al. (Database J. Biol. Databases Curation, 2016)

ENCODE data at the ENCODE portal. - Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Venkat S. Malladi; J. Seth Strattan; Benjamin C. Hitz; Idan Gabdank; Aditi K. Narayanan; Marcus Ho; Brian T. Lee; Laurence D. Rowe; Timothy R. Dreszer; et al. (Nucleic Acids Res., 2016)

Prevention of data duplication for high throughput sequencing repositories. - Idan Gabdank; Esther T. Chan; Jean M. Davidson; Jason A. Hilton; Carrie A. Davis; Ulugbek K. Baymuradov; Aditi K. Narayanan; Kathrina C. Onate; Keenan Graham; Stuart R. Miyasato; Timothy R. Dreszer; J. Seth Strattan; et al. (Database J. Biol. Databases Curation, 2018)

The Encyclopedia of DNA elements (ENCODE): data portal update. - Carrie A. Davis; Benjamin C. Hitz; Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Idan Gabdank; Jason A. Hilton; Kriti Jain; Ulugbek K. Baymuradov; Aditi K. Narayanan; Kathrina C. Onate; Keenan Graham; et al. (Nucleic Acids Res., 2018)

Data navigation on the ENCODE portal. - Meenakshi S. Kagda; Bonita Lam; Casey Litton; Corinn Small; Cricket A. Sloan; Emma Spragins; Forrest Tanaka; Ian Whaling; Idan Gabdank; Ingrid Youngworth; J. Seth Strattan; Jason A. Hilton; et al. (CoRR, 2023)