ParTIES: a toolbox for Paramecium interspersed DNA elimination studies. - Cyril Denby Wilkes; Olivier Arnaiz; Linda Sperling (Bioinform., 2016)

A quantitative modelling approach for DNA repair on a population scale. - Leo Zeitler; Cyril Denby Wilkes; Arach Goldar; Julie Soutourina (PLoS Comput. Biol., 2022)

A genome-wide comprehensive analysis of nucleosome positioning in yeast. - Leo Zeitler; Kévin André; Adriana Alberti; Cyril Denby Wilkes; Julie Soutourina; Arach Goldar (PLoS Comput. Biol., 2024)