Joint Nonparametric Alignment for Analyzing Spatial Gene Expression Patterns in Drosophila Imaginal Discs. - Parvez Ahammad; Cyrus L. Harmon; Ann Hammonds; Shankar Sastry 001; Gerald M. Rubin (CVPR (2), 2005)

Computational tools for the analysis of spatial patterns of gene expression in Common Lisp. - Cyrus L. Harmon (ILC, 2007)

Comparative Analysis of Spatial Patterns of Gene Expression in Drosophila melanogaster Imaginal Discs. - Cyrus L. Harmon; Parvez Ahammad; Ann Hammonds; Richard Weiszmann; Susan E. Celniker; Shankar Sastry 001; Gerald M. Rubin (RECOMB, 2007)

Genoviz Software Development Kit: Java tool kit for building genomics visualization applications. - Gregg A. Helt; John W. Nicol; Ed Erwin; Eric Blossom; Steven G. Blanchard Jr.; Stephen A. Chervitz; Cyrus L. Harmon; Ann E. Loraine (BMC Bioinform., 2009)